Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 10K

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 40


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -6.671 1.594 -0.036
2 C10 C C10 N Y N 0 -2.636 -0.946 1.23
3 C11 C C11 N N N 0 0.46 -2.519 -0.245
4 C12 C C12 N N N 0 1.604 -1.549 -0.093
5 C13 C C13 N Y N 0 3.933 -1.092 -0.023
6 C14 C C14 N Y N 0 5.121 0.771 0.27
7 C15 C C15 N Y N 0 3.828 0.248 0.189
8 C16 C C16 N N N 0 5.475 2.219 0.498
9 C17 C C17 N N N 0 4.374 3.258 0.278
10 C18 C C18 N N N 0 5.522 3.136 -0.726
11 C2 C C2 N Y N 0 -6.38 1.227 1.215
12 C3 C C3 N Y N 0 -5.203 0.52 1.358
13 C4 C C4 N Y N 0 -4.53 0.31 0.21
14 C5 C C5 N Y N 0 -3.248 -0.417 0.093
15 C6 C C6 N Y N 0 -2.642 -0.573 -1.155
16 C7 C C7 N Y N 0 -1.445 -1.252 -1.257
17 C8 C C8 N Y N 0 -0.846 -1.778 -0.126
18 C9 C C9 N Y N 0 -1.442 -1.628 1.114
19 H1 H H1 N N N 0 -7.548 2.152 -0.331
20 H10 H H10 N N N 0 -3.098 -0.825 2.199
21 H11 H H11 N N N 0 0.521 -3.277 0.536
22 H11A H H11A N N N 0 0.518 -2.999 -1.222
23 H15 H H15 N N N 0 2.908 0.807 0.279
24 H16 H H16 N N N 0 6.193 2.407 1.296
25 H17 H H17 N N N 0 3.394 2.895 -0.032
26 H17A H H17A N N N 0 4.367 4.13 0.931
27 H18 H H18 N N N 0 6.271 3.928 -0.732
28 H18A H H18A N N N 0 5.298 2.692 -1.696
29 H2 H H2 N N N 0 -7.017 1.467 2.053
30 H3 H H3 N N N 0 -4.85 0.164 2.315
31 H6 H H6 N N N 0 -3.108 -0.163 -2.038
32 H7 H H7 N N N 0 -0.975 -1.373 -2.221
33 H9 H H9 N N N 0 -0.97 -2.041 1.992
34 HN1 H HN1 N N N 0 3.055 -2.931 -0.313
35 HN2 H HN2 N N N 0 5.628 -2.277 -0.217
36 N1 N N1 N N N 0 2.875 -1.99 -0.164
37 N2 N N2 N Y N 0 5.251 -1.395 -0.073
38 N3 N N3 N Y N 0 5.973 -0.21 0.113
39 O O O N N N 0 1.379 -0.372 0.094
40 S S S N Y N 0 -5.412 1.034 -1.128