Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 0W3

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 122


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O0 O O0 N N N 0 5.627 2.744 0.481
2 O1 O O1 N N N 0 3.418 -0.181 0.013
3 C2 C C2 R N N 0 5.249 1.351 0.44
4 O2 O O2 N N N 0 8.803 4.034 -0.837
5 C3 C C3 S N N 0 3.76 1.206 0.119
6 O3 O O3 N N N 0 3.124 -2.67 -0.863
7 C4 C C4 S N N 0 7.049 2.799 0.275
8 O4 O O4 N N N 0 2.909 -5.014 -1.485
9 C5 C C5 S N N 0 2.455 -0.527 1.02
10 O5 O O5 N N N 0 -2.713 -3.196 1.626
11 C6 C C6 N N N 0 6.114 0.775 -0.711
12 O6 O O6 N N N 0 -2.3 -1.024 1.985
13 C7 C C7 N N N 0 2.917 1.808 1.263
14 O7 O O7 N N N 0 -6.328 6.083 -3.139
15 C8 C C8 N N N 0 7.443 1.549 -0.536
16 O8 O O8 N N N 0 -6.46 8.225 -2.615
17 C9 C C9 N N N 0 1.739 0.802 1.37
18 C10 C C10 N N N 0 3.441 1.922 -1.195
19 C11 C C11 R N N 0 7.413 4.062 -0.508
20 C12 C C12 N N N 0 1.452 -1.543 0.469
21 C13 C C13 N N N 0 7.771 2.793 1.624
22 C14 C C14 S N N 0 2.169 -2.863 0.182
23 C15 C C15 N N N 0 7.116 5.295 0.348
24 C16 C C16 S N N 0 1.145 -3.915 -0.25
25 C17 C C17 R N N 0 1.862 -5.236 -0.537
26 C18 C C18 N N N 0 0.123 -4.123 0.869
27 C19 C C19 R N N 0 0.863 -6.245 -1.108
28 C20 C C20 N N N 0 0.19 -5.655 -2.32
29 C21 C C21 N N N 0 1.602 -7.524 -1.507
30 C22 C C22 N N N 0 -1.117 -5.632 -2.398
31 C23 C C23 N N N 0 -1.949 -6.065 -1.219
32 C24 C C24 R N N 0 -2.979 -4.98 -0.895
33 C25 C C25 R N N 0 -4.663 -4.212 0.783
34 C26 C C26 N N N 0 -3.834 -3.029 1.211
35 C27 C C27 N N N 0 -3.381 -0.642 1.605
36 C28 C C28 N N N 0 -3.74 -5.362 0.376
37 C29 C C29 S N N 0 -3.706 0.83 1.615
38 C30 C C30 N N N 0 -4.404 -1.636 1.12
39 C31 C C31 N N N 0 -2.423 1.637 1.407
40 C32 C C32 S N N 0 -2.762 3.128 1.356
41 C33 C C33 N N N 0 -3.963 -4.848 -2.058
42 C34 C C34 N N N 0 -5.553 -4.658 1.945
43 C35 C C35 N N N 0 -3.675 3.403 0.159
44 C36 C C36 N N N 0 -4.332 1.204 2.96
45 C37 C C37 R N N 0 -4.114 4.869 0.179
46 C38 C C38 N N N 0 -1.473 3.939 1.211
47 C39 C C39 N N N 0 -4.924 5.175 -1.082
48 C40 C C40 N N N 0 -4.979 5.125 1.415
49 C41 C C41 N N N 0 -5.257 6.668 -1.124
50 C42 C C42 N N N 0 -6.054 6.97 -2.366
51 H2 H H2 N N N 0 5.489 0.86 1.383
52 HO2 H HO2 N N N 0 9.105 4.807 -1.335
53 HO3 H HO3 N N N 0 2.738 -2.367 -1.697
54 HO4 H HO4 N N N 0 2.603 -4.665 -2.333
55 H5 H H5 N N N 0 2.957 -0.929 1.901
56 H6 H H6 N N N 0 6.267 -0.296 -0.583
57 H6A H H6A N N N 0 5.664 0.989 -1.68
58 H7 H H7 N N N 0 3.487 1.837 2.192
59 H7A H H7A N N N 0 2.559 2.803 0.999
60 H8 H H8 N N N 0 7.848 1.836 -1.506
61 H8A H H8A N N N 0 8.165 0.947 0.018
62 HO8 H HO8 N N N 0 -6.969 8.37 -3.424
63 H9 H H9 N N N 0 0.96 1.031 0.642
64 H9A H H9A N N N 0 1.334 0.776 2.381
65 H10 H H10 N N N 0 2.362 1.928 -1.353
66 H10A H H10A N N N 0 3.807 2.947 -1.149
67 H10B H H10B N N N 0 3.926 1.4 -2.02
68 H11 H H11 N N N 0 6.823 4.105 -1.423
69 H12 H H12 N N N 0 0.664 -1.709 1.203
70 H12A H H12A N N N 0 1.015 -1.158 -0.452
71 H13 H H13 N N N 0 7.5 1.893 2.177
72 H13A H H13A N N N 0 8.848 2.809 1.46
73 H13B H H13B N N N 0 7.477 3.673 2.197
74 H14 H H14 N N N 0 2.68 -3.203 1.083
75 H15 H H15 N N N 0 7.376 6.195 -0.209
76 H15A H H15A N N N 0 6.056 5.317 0.6
77 H15B H H15B N N N 0 7.706 5.252 1.264
78 H16 H H16 N N N 0 0.634 -3.576 -1.151
79 H17 H H17 N N N 0 2.286 -5.628 0.387
80 H18 H H18 N N N 0 0.626 -4.517 1.752
81 H18A H H18A N N N 0 -0.346 -3.17 1.114
82 H18B H H18B N N N 0 -0.639 -4.829 0.539
83 H19 H H19 N N N 0 0.112 -6.479 -0.354
84 H20 H H20 N N N 0 0.786 -5.25 -3.125
85 H21 H H21 N N N 0 2.02 -7.995 -0.617
86 H21A H H21A N N N 0 0.905 -8.211 -1.988
87 H21B H H21B N N N 0 2.406 -7.278 -2.2
88 H22 H H22 N N N 0 -1.599 -5.303 -3.307
89 H23 H H23 N N N 0 -2.465 -6.995 -1.459
90 H23A H H23A N N N 0 -1.303 -6.221 -0.355
91 H24 H H24 N N N 0 -2.468 -4.029 -0.741
92 H25 H H25 N N N 0 -5.288 -3.93 -0.065
93 H28 H H28 N N N 0 -4.334 -6.256 0.189
94 H28A H H28A N N N 0 -3.03 -5.559 1.18
95 H29 H H29 N N N 0 -4.41 1.052 0.812
96 H30 H H30 N N N 0 -4.662 -1.416 0.084
97 H30A H H30A N N N 0 -5.298 -1.569 1.739
98 H31 H H31 N N N 0 -1.737 1.448 2.233
99 H31A H H31A N N N 0 -1.954 1.339 0.47
100 H32 H H32 N N N 0 -3.271 3.417 2.275
101 H33 H H33 N N N 0 -4.639 -4.014 -1.869
102 H33A H H33A N N N 0 -3.413 -4.667 -2.982
103 H33B H H33B N N N 0 -4.539 -5.768 -2.153
104 H34 H H34 N N N 0 -4.929 -5.021 2.762
105 H34A H H34A N N N 0 -6.149 -3.814 2.29
106 H34B H H34B N N N 0 -6.214 -5.458 1.61
107 H35 H H35 N N N 0 -3.134 3.198 -0.765
108 H35A H H35A N N N 0 -4.553 2.76 0.217
109 H36 H H36 N N N 0 -3.655 0.924 3.767
110 H36A H H36A N N N 0 -4.509 2.279 2.991
111 H36B H H36B N N N 0 -5.278 0.676 3.08
112 H37 H H37 N N N 0 -3.234 5.511 0.211
113 H38 H H38 N N N 0 -1.703 5.003 1.277
114 H38A H H38A N N N 0 -0.781 3.667 2.008
115 H38B H H38B N N N 0 -1.016 3.726 0.244
116 H39 H H39 N N N 0 -4.339 4.909 -1.963
117 H39A H H39A N N N 0 -5.848 4.597 -1.071
118 H40 H H40 N N N 0 -4.402 4.907 2.314
119 H40A H H40A N N N 0 -5.292 6.169 1.429
120 H40B H H40B N N N 0 -5.858 4.483 1.383
121 H41 H H41 N N N 0 -5.841 6.935 -0.243
122 H41A H H41A N N N 0 -4.333 7.246 -1.136