Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 0V2

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 76


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 5.64 2.349 0.49
2 C1 C C1 N Y N 0 6.363 1.201 0.431
3 C2 C C2 N Y N 0 5.766 -0.038 0.633
4 C3 C C3 N N N 0 4.291 -0.129 0.925
5 C4 C C4 N N N 0 3.518 -0.259 -0.388
6 N2 N N2 N N N 0 2.079 -0.348 -0.103
7 C5 C C5 N N N 0 1.304 -0.474 -1.344
8 C6 C C6 N N N 0 -0.186 -0.563 -1.008
9 C7 C C7 N N N 0 -0.984 -0.819 -2.288
10 C8 C C8 N N N 0 -2.474 -0.909 -1.951
11 C9 C C9 N N N 0 -2.934 0.405 -1.318
12 C24 C C24 N N N 0 -2.136 0.661 -0.038
13 C25 C C25 N N N 0 -0.646 0.751 -0.374
14 C26 C C26 N Y N 0 6.54 -1.196 0.564
15 C27 C C27 N Y N 0 7.922 -1.11 0.289
16 N3 N N3 N Y N 0 8.395 -2.416 0.289
17 C28 C C28 N Y N 0 7.331 -3.23 0.552
18 N4 N N4 N N N 0 7.39 -4.603 0.637
19 C29 C C29 N N N 0 8.665 -5.295 0.438
20 N5 N N5 N Y N 0 6.246 -2.513 0.713
21 C30 C C30 N Y N 0 8.521 0.116 0.087
22 C40 C C40 N Y N 0 7.752 1.277 0.156
23 C41 C C41 N N N 0 8.344 2.603 -0.053
24 O1 O O1 N N N 0 9.531 2.733 -0.293
25 N6 N N6 N N N 0 7.525 3.677 0.031
26 C42 C C42 N N N 0 6.196 3.518 0.3
27 N7 N N7 N N N 0 5.405 4.638 0.375
28 H2 H H2 N N N 0 4.097 -1.002 1.549
29 H3 H H3 N N N 0 3.968 0.77 1.45
30 H4 H H4 N N N 0 3.711 0.614 -1.012
31 H5 H H5 N N N 0 3.841 -1.158 -0.913
32 H6 H H6 N N N 0 1.882 -1.112 0.526
33 H8 H H8 N N N 0 1.482 0.398 -1.974
34 H9 H H9 N N N 0 1.611 -1.375 -1.875
35 H10 H H10 N N N 0 -0.352 -1.382 -0.307
36 H11 H H11 N N N 0 -0.819 -0.0010 -2.989
37 H12 H H12 N N N 0 -0.656 -1.756 -2.739
38 H13 H H13 N N N 0 -3.042 -1.092 -2.863
39 H14 H H14 N N N 0 -2.639 -1.727 -1.25
40 H15 H H15 N N N 0 -2.768 1.224 -2.019
41 H17 H H17 N N N 0 -2.464 1.598 0.414
42 H18 H H18 N N N 0 -2.301 -0.157 0.663
43 H19 H H19 N N N 0 -0.078 0.933 0.538
44 H20 H H20 N N N 0 -0.481 1.569 -1.075
45 H21 H H21 N N N 0 9.309 -2.697 0.13
46 H22 H H22 N N N 0 6.587 -5.111 0.828
47 H23 H H23 N N N 0 9.046 -5.076 -0.56
48 H24 H H24 N N N 0 9.384 -4.954 1.183
49 H25 H H25 N N N 0 8.516 -6.37 0.542
50 H27 H H27 N N N 0 9.578 0.176 -0.123
51 H28 H H28 N N N 0 5.793 5.516 0.237
52 H29 H H29 N N N 0 4.458 4.551 0.565
53 C10 C C10 N N N 0 -4.367 0.319 -0.994
54 C11 C C11 N N N 0 -5.51 0.25 -0.735
55 C12 C C12 N Y N 0 -6.904 0.166 -0.42
56 C13 C C13 N Y N 0 -7.554 1.252 0.17
57 C14 C C14 N Y N 0 -8.895 1.171 0.473
58 C15 C C15 N Y N 0 -9.604 0.0030 0.191
59 C16 C C16 N Y N 0 -8.956 -1.082 -0.399
60 C17 C C17 N Y N 0 -7.617 -1.0 -0.708
61 H7 H H7 N N N 0 -7.005 2.156 0.39
62 H16 H H16 N N N 0 -9.397 2.01 0.93
63 H30 H H30 N N N 0 -9.506 -1.986 -0.616
64 H31 H H31 N N N 0 -7.115 -1.841 -1.165
65 C18 C C18 N Y N 0 -11.048 -0.084 0.517
66 C19 C C19 N Y N 0 -11.76 -1.249 0.237
67 C20 C C20 N Y N 0 -13.103 -1.325 0.543
68 C21 C C21 N Y N 0 -13.743 -0.247 1.129
69 C22 C C22 N Y N 0 -13.042 0.912 1.409
70 C23 C C23 N Y N 0 -11.697 0.997 1.112
71 H26 H H26 N N N 0 -11.261 -2.091 -0.221
72 H32 H H32 N N N 0 -13.656 -2.227 0.326
73 H33 H H33 N N N 0 -14.795 -0.311 1.367
74 H34 H H34 N N N 0 -13.547 1.75 1.866
75 H35 H H35 N N N 0 -11.151 1.902 1.332
76 H351 H H351 N N N 0 7.885 4.568 -0.101