Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 0MY

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 42


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O2 O O2 N N N 0 4.831 2.392 -0.165
2 S1 S S1 N N N 0 3.609 1.721 -0.439
3 O1 O O1 N N N 0 2.974 1.751 -1.71
4 C14 C C14 N Y N 0 3.878 0.022 -0.057
5 C17 C C17 N Y N 0 3.173 -0.958 -0.73
6 C18 C C18 N Y N 0 3.385 -2.292 -0.43
7 CL1 CL CL1 N N N 0 2.499 -3.523 -1.276
8 C19 C C19 N Y N 0 4.302 -2.644 0.543
9 C16 C C16 N Y N 0 5.008 -1.663 1.215
10 C15 C C15 N Y N 0 4.799 -0.331 0.911
11 N4 N N4 N N N 0 2.503 2.299 0.649
12 C11 C C11 N Y N 0 1.205 1.785 0.665
13 C10 C C10 N Y N 0 0.817 0.909 1.672
14 C9 C C9 N Y N 0 -0.464 0.4 1.689
15 C12 C C12 N Y N 0 0.3 2.155 -0.324
16 C13 C C13 N Y N 0 -0.982 1.65 -0.31
17 C8 C C8 N Y N 0 -1.371 0.766 0.695
18 C1 C C1 N Y N 0 -2.751 0.219 0.711
19 C4 C C4 N Y N 0 -3.65 0.584 -0.278
20 C6 C C6 N Y N 0 -4.946 0.064 -0.254
21 C5 C C5 N Y N 0 -6.121 0.227 -1.112
22 N3 N N3 N N N 0 -6.202 1.022 -2.258
23 N2 N N2 N Y N 0 -7.081 -0.505 -0.612
24 C7 C C7 N Y N 0 -5.325 -0.823 0.772
25 N1 N N1 N Y N 0 -6.633 -1.162 0.538
26 C3 C C3 N Y N 0 -4.403 -1.176 1.756
27 C2 C C2 N Y N 0 -3.138 -0.669 1.723
28 H17 H H17 N N N 0 2.456 -0.682 -1.49
29 H19 H H19 N N N 0 4.468 -3.685 0.777
30 H16 H H16 N N N 0 5.724 -1.938 1.975
31 H15 H H15 N N N 0 5.354 0.435 1.434
32 HN4 H HN4 N N N 0 2.757 2.994 1.276
33 H10 H H10 N N N 0 1.52 0.627 2.441
34 H9 H H9 N N N 0 -0.765 -0.281 2.471
35 H12 H H12 N N N 0 0.602 2.839 -1.103
36 H13 H H13 N N N 0 -1.685 1.937 -1.078
37 H4 H H4 N N N 0 -3.352 1.266 -1.061
38 HN3 H HN3 N N N 0 -5.43 1.532 -2.55
39 HN3A H HN3A N N N 0 -7.03 1.065 -2.762
40 HN1 H HN1 N N N 0 -7.164 -1.762 1.085
41 H3 H H3 N N N 0 -4.69 -1.856 2.544
42 H2 H H2 N N N 0 -2.429 -0.951 2.487