Chemical Components in the PDB

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  • XYS (Stereoisomer)
  • RIP (Stereoisomer)
  • HSY (Stereoisomer)
  • LDY (Stereoisomer)
  • ARB (Stereoisomer)
  • ARA (Stereoisomer)
  • LXC (Stereoisomer)
  • XYP (Stereoisomer)

PDBeChem : Atoms of Molecule

 Molecule : 0MK

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 20


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 S N N 0 -1.251 -0.532 0.302
2 C2 C C2 S N N 0 -0.814 0.652 -0.565
3 C3 C C3 S N N 0 0.661 0.959 -0.289
4 C4 C C4 S N N 0 1.493 -0.298 -0.561
5 C5 C C5 N N N 0 0.966 -1.446 0.306
6 H1 H H1 N N N 0 -1.16 -0.265 1.355
7 H10 H H10 N N N 0 3.446 -0.802 -0.381
8 H2 H H2 N N N 0 -0.944 0.401 -1.617
9 H3 H H3 N N N 0 0.994 1.766 -0.942
10 H4 H H4 N N N 0 1.41 -0.569 -1.613
11 H5 H H5 N N N 0 1.527 -2.354 0.085
12 H6 H H6 N N N 0 1.086 -1.191 1.359
13 H7 H H7 N N N 0 -2.955 -1.604 0.522
14 H8 H H8 N N N 0 -2.555 1.671 -0.391
15 H9 H H9 N N N 0 1.732 1.562 1.321
16 O1 O O1 N N N 0 -2.611 -0.86 0.0090
17 O2 O O2 N N N 0 -1.608 1.797 -0.245
18 O3 O O3 N N N 0 0.821 1.352 1.076
19 O4 O O4 N N N 0 2.861 -0.045 -0.237
20 O5 O O5 N N N 0 -0.418 -1.659 0.022