Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 0JO

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 34


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C C C N N N 0 3.194 -2.585 -0.468
2 C2 C C2 N Y N 0 0.909 3.405 -0.195
3 C2A C C2A N N N 0 1.662 4.703 -0.328
4 C3 C C3 N Y N 0 1.61 2.222 -0.0070
5 C4 C C4 N Y N 0 0.891 1.02 0.114
6 C4A C C4A N N N 0 1.587 -0.262 0.315
7 C5 C C5 N Y N 0 -0.507 1.077 0.034
8 C5A C C5A N N N 0 -1.331 -0.179 0.152
9 C6 C C6 N Y N 0 -1.117 2.3 -0.15
10 CA C CA N N N 0 3.54 -1.493 0.466
11 CB C CB N N N 0 4.497 -1.679 1.393
12 H1 H H1 N N N 0 3.641 -4.414 -1.088
13 H10 H H10 N N N 0 -1.055 -0.871 -0.644
14 H11 H H11 N N N 0 -1.147 -0.645 1.119
15 H12 H H12 N N N 0 -6.074 -0.823 0.126
16 H13 H H13 N N N 0 -3.845 -1.52 -1.998
17 H2 H H2 N N N 0 4.75 -0.881 2.076
18 H3 H H3 N N N 0 5.012 -2.626 1.456
19 H4 H H4 N N N 0 1.02 -1.176 0.402
20 H5 H H5 N N N 0 3.401 2.114 -0.799
21 H6 H H6 N N N 0 1.893 4.884 -1.378
22 H7 H H7 N N N 0 1.049 5.519 0.055
23 H8 H H8 N N N 0 2.589 4.646 0.243
24 H9 H H9 N N N 0 -2.194 2.352 -0.209
25 N N N N N N 0 2.887 -0.293 0.387
26 N1 N N1 N Y N 0 -0.407 3.406 -0.26
27 O O O N N N 0 2.273 -2.447 -1.248
28 O3 O O3 N N N 0 2.966 2.226 0.057
29 OP1 O OP1 N N N 0 -5.321 -0.218 0.081
30 OP2 O OP2 N N N 0 -3.769 -1.956 -1.138
31 OP3 O OP3 N N N 0 -3.759 -1.721 1.376
32 OP4 O OP4 N N N 0 -2.718 0.149 0.037
33 OXT O OXT N N N 0 3.902 -3.73 -0.456
34 P P P N N N 0 -3.889 -0.953 0.117