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Title:
Paired beta-sheet structure of an Abeta(1-40) amyloid fibril revealed by electron microscopy
Authors:
C.Sachse,M.Faendrich,N.Grigorieff
Sample:
human Abeta(1-40)
Aggregation state:
Helical (8.8 angstroms resolution)
Latest update:
2009-10-14
Summary
Experimental details
Visualization
Map information
Downloads
Sample
Sample name:
human Abeta(1-40)
Theoretical molecular weight of the sample:
0.004330
Components:
ID
Type
Name
Exp. MW (MDa)
Oligomeric details
Recombinant expression
Synthetic
Organism
GO identifier
InterPro identifier
Virus identifier
Details
1
protein
Abeta
false
IPR013803
Experiment
Sample preparation:
pH
Sample conc.
Details
Staining
Sample support details
7.8
1 mg/mL
50 mM Borate
Quantifoil R1.2/1.3 Cu 400 mesh grids
Vitrification:
Cryogen name
Humidity
Temp.
Instr.
Method
Time resolved
Details
ETHANE
%
77.2 K
NONE
Blot for 7 seconds before plunging
ms
Vitrification carried out in cold room at 277 K.
Imaging:
Microscope
Voltage
Illumination mode
Imaging mode
Cs
Defocus min.
Defocus max.
Nominal mag.
Calibrated mag.
Electron source
Detector
Detector distance
Astigmatism
FEI TECNAI F30
300 kV
FLOOD BEAM
BRIGHT FIELD
2.0 mm
1900 nm
3500 nm
59000
58333
FIELD EMISSION GUN
Kodak SO163 film
mm
objective lens astigmatism was corrected at 200,000 times magnification
Specimen holder
Holder model
Tilt min.
Tilt max.
Energy filter
Energy window
Temp.
Temp. min.
Temp. max.
Beam tilt
Electron dose
Other details
Date
Side entry liquid nitrogen-cooled cryo specimen holder
GATAN LIQUID NITROGEN
0°
0°
eV
93 K
K
K
mrad
35 e/Å
2
09-Nov-2005
Processing
Software:
SPIDER
CTF correction:
Each particle CTFTILT
Resolution by author:
8.8 Å
Resolution method:
FSC at 0.5 cut-off
Unit cell:
Scanned images:
Num. images
Sampling size
OD range
Quant. bit number
Other details
Scanner
62
7 μm/pixel
8
link
ZEISS SCAI
Fitting:
PDB
Protocol
Target crit.
Software
B value
Fitting space
PDB chain
Details