triangle PDBeMotif: 3j38  
  coner Sequences coner   coner 3D motifs coner   coner Ligand environment coner   coner Ligand bonds coner
   
coner
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coner
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Classification ribosome    | release date: Wed, Feb 27, 2013
Title structure of the d. melanogaster 40s ribosomal proteins
Authors A.M.ANGER, D.N.WILSON, J.-P.ARMACHE, M.HABECK, M.SUBKLEWE, O.BERNINGHAUSEN, R.BECKMANN
Method ELECTRON MICROSCOPY (resolution: 6.00Å)
PDBe Citation   
Ligand bond colours:   *  covalent   *  ionic   *  hydrogen   *  electrostatic   *  van-der-waals   *  plane-atom   *  plane-plane   *  undefined  - Click here to show 5Å bonds
Chain z sequence:
MVNFTVDEIRGLMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTRKDEQERCITIKSTAISMYFE
VEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPILF
MNKMDRALLELQLDAEELYQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYSEKFK
IDVVKLMNRLWGENFFNAKTKKWQKQKEADNKRSFCMYILDPIYKVFDAIMNYKKEEIGTLLEKIGVTLKHEDKDKDGKA
LLKTVMRTWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIAVKSCDPDGPLMMYISKMVPTSDKGRFYAFG
RVFAGKVATGQKCRIMGPNYTPGKKEDLYEKAIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKDAHNM
KVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSD
PVVSYRETVSEESDQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIWCFGP
DGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAI
TAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVF
DHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL
Chain g sequence:
MSETLQLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYAL
SGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPN
HSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINAL
CFSPNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSVSAH
Chain U sequence:
MAAAPKDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEGSKTWD
RFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN
Chain K sequence:
MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAWRHFYWLLTNEGIEELRRY
LHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKTDDDRSNYRRGPGAYGMDKKGDVGAGTGRVEYRGGFGRASR
YDN
Chain O sequence:
MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQD
VAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDSTRRKGGRRGRRL
Chain X sequence:
MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK
ITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS
Chain M sequence:
MADVDVDVPSAAPVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQ
IPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALDVVKDHLRQNS
Chain S sequence:
MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP
NWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK
Chain d sequence:
MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD
Chain N sequence:
MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILRIMKSVGL
KPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA
Chain L sequence:
MADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQ
RTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKVSKGQGAKKSFKKY
Chain R sequence:
MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERER
RDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNNFGRRN
Chain P sequence:
MADQVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKAKKEAPPNEKPEIVK
THLRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSSRFIPLK
Chain T sequence:
MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYG
GRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRIANQIVFKQRDAAKQTGPIVISK
Chain B sequence:
MAVGKNKGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP
ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQ
QSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGG
KSVEAVVSSEGAVIDRPEGYEPPVQEAV
Chain A sequence:
MCRRLWRQARHRRKVARGAPSLRLCPLTICLSRSQVRNSFHVNMSGGLDILSLKEDDITKMLVATTHLGSENVNFQMEQY
VYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFR
EPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPV
VVDLFFYRDPEEAEKEEAAAKELLPPPKIEEAVDHPVEETTNWADEVAAETVGGVEDWNEDTVKTSWGSDGQF
Chain V sequence:
MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVVDVDPETGRQTDGSKTYAICGAIRRMGESDDSILRLAKADGIVS
KNF
Chain Y sequence:
MSGTTATIRTRKFMTNRLLARKQMVCDVLHPGLSSVNKTEIREKLAAMYKVTPDVVFAFGFRTNFGGGRSTGFALIYDTL
DFAKKFEPKYRLARHGLFEQKKQTRKQRKERRNRMKKVRGTAKAKIGTGKK
Chain Z sequence:
MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAYKLITPSVVSERLKIRG
SLAKRALIELREKGLIKQVVQHHSQVIYTRATKGDEA
Chain a sequence:
MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIH
SKVVRNRSREARRIRTPPLRSFPKDMARNNQNRK
Chain b sequence:
MPLAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCATILCQPTGGRAKLTEGCSFR
RKPQ
Chain c sequence:
MDKPVVWARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILTLLESEREARRLR
Chain D sequence:
MNANLPISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFN
FETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMI
HSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPPSKPLDDL
SEAKVL
Chain e sequence:
MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSSFELDLNIPMLGGKVHGSLAR
AGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGFGRRRGPNANST
Chain f sequence:
AKKRKKKNYSTPKKIKHKRKKVKLAVLKYYKVDENGKIHRLRRECPGENCGAGVFMAAHEDRHYCGKCNLTFVFSKPEEK
Chain J sequence:
MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLR
RLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDF
SLKSPFGGGRPGRVKRKNLKKNQGGGGGAAEEEED
Chain E sequence:
MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDP
TYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSV
QVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPK
GKGVKLSIAEERDKRLAAKTH
Chain C sequence:
MADEAPARSGFRGGFGSRGGRGGRGRGRGRWARGRGKEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFF
LGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKP
HTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWK
EMPLGSTPYQAYSDFLSKPTPRLHADA
Chain G sequence:
MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKG
HSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRR
PLPAKDNKKATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREEAKRRRSASIRESK
SSVSSDKK
Chain F sequence:
MAEVAENVVETFEEPAAPMEAEVAETILETNVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRY
AAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRR
QAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR
Chain H sequence:
MAIGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRE
LEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQ
QTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYLNV
Chain W sequence:
MVRMNVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGEFEIVDDHRSGKIVVNLTGRLNKCGVISPRFD
VPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILGFFF
Chain I sequence:
MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARKTRIAD
VVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKV
EQALEDQFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK
Chain Q sequence:
MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGVDIRVRVSGGGHV
AQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSYR
Chain h sequence:
YGNKESNGEFGNELPQRQFNNRDNRGPPRVRTGEKFGKREFDRQSGSDRTGVKSIDKREGGGAHNWGSPKQDIEDLKTTG
ETSPQAEKEDSANEQSADPAVAAEKEEPKEMTLDEWKAIQN
Residue colours:  hydrophilic   hydrophobic   intermediate 
Assembly 1     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain z : ELONGATION FACTOR 2
sec str:  ....hhhhhhhhhh...eeeeeeee....hhhhhhhhhhhhh................hhhhhh.......eeeeee.hhhhhhhh...........eeeeee.........hhhhhhhhhhh.eeeeeee.....hhhhhhhhhhhhhh..eeeeeeehhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh.................eeee......eehhhhhhhhhhh....hhhhhhhhh....ee......ee........hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.....hhhhhhhhhh......eeeeeeee........eeeeeeee.......eeeee...........eeeee..eeeeee..eeeee.......eeeee.........eeee..................eeeeeee....hhhhhhhhhhhhhhhh...eeee.....eeeee.hhhhhhhhhhhhhhh.....eeee......eeee.......ee........eeeeeeee..hhhhhhhhh.......hhhhhhhhhhhh...hhhhhhh...ee......eeee.......hhhhhhhhhhhhhhhhhhh..........eeee...ee........hhhhhhhhhhhhhhhhhhhh.eeeeeeeeeeeeeehhhhhhhhhhhhhhh......eee......eeeeeeee.hhh.hhhhhhhhhhh...eeee...eeeee..........hhhhhhhhhhhhh......hhhhhh...
sequence :  ..FTVDEIRGLMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGA..TRFTDTRKDEQERCITIKSTAISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYSEKFKIDVVKLMNRLWGENFFNAKTKKWQKQKEADNKRSFCMYILDPIYKVFDAIMNYKKEEIGTLLEKIGVTLKHEDKDKDGKALLKTVMRTWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIAVKSCDPDGPLMMYISKMVPTSDKGRFYAFGRVFAGKVATGQKCRIMGPNYTPGKKEDLYEKAIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKDAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL
seq num:  ..4         14        24        34        44    ..54        64        74        84        94        104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734       744       754       764       774       784       794       804       814       824       834        
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..*** |       |  | ^*** |   ||||| ||   | ||||  |..  | || ||   | || | |            |  ||  || |              |||| | | |    ||||                        | |       | |     | |                 |  || || |    || |                  | |      | || || |   |  |    | | | | | |                      |  |       |  | | || |  | |        |   |                 | |   |   |  |  |  |   |   | |  |            | |                       |  ||| |||             |  |         |    |          |  ||||||  ||||| | |  |     | |              |  | | |                              | |         | |||  | | |       ||||                      | ||      |  | || |    |  |      | |  |  | |  |  |          |   |     | |   |    |                |  |||        | | |     |           |    |   | |                      ^***     | | ||        | |      |  | | |       | | |||   |   |  |   
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE .. |  |       |  |      |   ||||| ||   | ||||  |..  | |^**|   | |^** |            |  ||  || |              |||| | | |    ||||                        | |       | |     | |                 |  || || |    || |                  ^**      ^**| || |   |  |    | | ^** | |                      |  |       |  | | |^**  | |        |   |                 | |   |   |  |  |  |   |   | |  |            ^**                       |  ||| |||             |  |         |    |          |  |^**||  ||||| | |  |     | |              |  | | |                              | |         ^**||  | | |       ||||                      ^**|      |  ^**| |    |  |      | |  |  | |  |  |          |   |     | |   |    |                |  ^**        ^** |     |           |    |   | |                      |  |     | | ||        | |      |  | ^**       ^** |||   |   |  |   
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE .. ^***       |  |      |   ||||^***   | ||||  |..  | |^***   | |    |            |  |^***| |              |||| | | |    ||||                        | |       | |     | |                 |  |^*** |    || |                              | || |   |  |    | | | | | |                      |  |       ^*** | |     | |        |   |                 | |   |   |  |  |  |   |   | |  |                                      |  ||| |||             |  |         |    |          |  |^***|  ||||| | |  |     | |              |  | | |                              | |         ^***^*** | |       ||||                      ^***      |     | |    |  |      | |  |  | |  |  |          |   |     | |   |    |                |   |             |     |           |    |   | |                      |  |     | | ||        | |      |  | | |           |||   |   |  |   
search RasMol script viewer Motif-ligand binding stats  TYR_PHOSPHO_SITE ..            |  |      |   ||||  ||   | ||||  |..  | |       | |    |            |  |    | |              |||| | | |    ||||                        | |       | |     | |                 |  || |  |    || |                              | || |   |  |    | | | | | |                      |  |            | |     | |        |   |                 | |   *******^  |  |   |   | |  |                                      |  ||| |||             |  |         |    |          |  | |  |  ||||| | |  |     | |              |  | | |                              | |                  | |       ||||                      |  |      ********^    |  |      | |  |  | |  |  |          |   |     | |   |    |                |   |             ******^           |    |   | |                      |  |     | | ||        | |      |  | | |           |||   |   |  |   
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..            |  |      |   ||||  ||   | |^*****..  | |       | |    |            |  |    | |              |||| | | |    ||||                        | |       | |     | |                 |  || |  ^*****| |                              | || |   |  |    | | | | | |                      |  |            | |     | |        |   |                 | |       |  |  |  |   |   | |  |                                      |  ||| |||             |  |         ^*****          ^*****  |  ||||| | |  |     | |              |  | | |                              | |                  | |       ||||                      |  |            | |    |  |      ^*****  | |  |  |          |   |     | |   ^*****                |   |                               ^*****   | |                      |  |     | | ||        | |      |  | | |           |^*****   |  |   
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..            |  |      |   ||||  ||   | ||||   ..  | |       | |    |            |  |    | |              |||| | | |    ||||                        | |       | |     | |                 |  || |        | |                              | || |   |  |    | | | | | |                      |  |            | |     | |        |   |                 | |       |  |  |  |   |   | |  |                                      |  ||^***|             |  |                            | |  |  ||||| | |  |     | |              |  | | |                              | |                  | |       ||||                      |  |            | |    |  |      | |     | |  |  |          |   |     | |                         |   |                                        | |                      |  |     | | ||        | |      |  | | |           | |       |  |   
search RasMol script viewer Motif-ligand binding stats  ATP_GTP_A ..            |  |      ********  ||   | ||||   ..  | |       | |    |            |  |    | |              |||| | | |    ||||                        | |       | |     | |                 |  || |        | |                              | || |   |  |    | | | | | |                      |  |            | |     | |        |   |                 | |       |  |  |  |   |   | |  |                                      |  ||  | |             |  |                            | |  |  ||||| | |  |     | |              |  | | |                              | |                  | |       ||||                      |  |            | |    |  |      | |     | |  |  |          |   |     | |                         |   |                                        | |                      |  |     | | ||        | |      |  | | |           | |       |  |   
search RasMol script viewer Motif-ligand binding stats  G_TR_1 ..            |  |          ||||  ||   | ||||   ..  | ****************            |  |    | |              |||| | | |    ||||                        | |       | |     | |                 |  || |        | |                              | || |   |  |    | | | | | |                      |  |            | |     | |        |   |                 | |       |  |  |  |   |   | |  |                                      |  ||  | |             |  |                            | |  |  ||||| | |  |     | |              |  | | |                              | |                  | |       ||||                      |  |            | |    |  |      | |     | |  |  |          |   |     | |                         |   |                                        | |                      |  |     | | ||        | |      |  | | |           | |       |  |   
search RasMol script viewer Motif-ligand binding stats  betaturn ..            |  |          ||||  ||   | ||||   ..  | |       | |                 |  |    | |              |||| | | |    ||||                        | |       | |     | |                 |  || |        | |                              | || |   |  |    | | | | | |                      |  |            | |     | |        |   |                 | |       |  |  |  |   |   | |  |                                      ****|  | |             |  |                            | |  |  ||||| | |  |     | |              |  | | |                              | |                  | |       ||||                      |  |            | |    |  |      | |     | |  ****          |   |     | |                         |   |                                        | |                      |  |     | | ||        | |      |  | | |           | |       |  |   
search RasMol script viewer Motif-ligand binding stats  gammaturn ..            |  |          ||||  ||   | ||||   ..  | |       | |                 |  |    | |              |||| | | |    ||||                        | |       | |     | |                 |  || |        | |                              | || |   |  |    *** | | | |                      |  |            | |     | |        |   |                 | |       |  |  |  |   |   | |  |                                      |  ||  | |             |  |                            | |  |  ***|| | |  |     | |              |  | ***                              | |                  | |       ||||                      |  |            | |    |  |      | |     | |                |   |     | |                         |   |                                        | |                      |  |     | | ||        | |      |  | | |           | |       |  |   
search RasMol script viewer Motif-ligand binding stats  nest ..            |  |          ****  ||   | ****   ..  ***       ***                 |  |    ***              ****** | |    ****                        ***       ***     ***                 |  || |        ***                              ******   |  |        *** ***                      |  |            ***     | |        |   |                 | |       |  |  |  |   |   ***  |                                      |  ||  | |             |  |                            | |  |   | |*** |  |     | |              |  |                                  ***                  | |       ****                      |  |            ***    |  |      | |     | |                |   |     ***                         |   |                                        ***                      |  |     | | ||        ***      |  | ***           ***       |  |   
search RasMol script viewer Motif-ligand binding stats  niche ..            ****            |   ||   |        ..                                ****                          | | |                                                                      |  ****                                                  ****                                     ****                    ***        |   |                 | |       ****  ****   |   | ****                                      **********             ****                            ******   ***    ****     ***              ****                                                       ***        ***                      ****                   ****      ***     ***                |   |                                 |   |                                                                 ****     | ****                 ****                         ****   
search RasMol script viewer Motif-ligand binding stats  ststaple ..                            **********        ..                                                              *****                                                                      *****                                                                                                                                *****                 | |                    *****                                                                                                                                                                                                                                                                                                       *****                                 *****                                                                          *****                                                      
search RasMol script viewer Motif-ligand binding stats  stturn ..                                              ..                                                              ***                                                                                                                                                                                                                                   ***                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                

chain g : GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT BETA-LPROTEIN;
sec str:  ......eeeeeeee.....eeeeee......eeeeee...eeeeee..........eeeeeee.....eeeeee.....eeeeee.....eeee....eeeee.......eeeeee.....eeeeee....eeeee....eeeee........eeeeee.......eeeeee...eeeeee.......eee......eeeeee.....eeeeee....eeeee....eeeeee.....eeeeee.....eeeeee..eeeeee....eeeeee...............eeeeee.....eeeeee...eeeeeee.....
sequence :  ..MSETLQLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINALCFSPNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSVSAH
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311     
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION .. | |    |    |            |  |      | |      ||||   |              ||   | |   |     | | |   |    | |                |||||     | | |   |  |   || |              ^*** ||       | |   | ||||||              | ||||| ||    |     | | | ||             |  |         | |        |  |        ||| |           ||||      | | |         
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE .. | |    |    |            |  |      | |      ||||   |              ||   | |   |     | ^**   |    ^**                |||||     | ^**   |  |   || |                 | ||       ^**   | ||||||              | ||||| ||    |     | | | ||             |  |         ^**        |  |        ^** |           ||||      | ^**         
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE .. | |    |    |            |  |      | |      ^***   |              ||   | |   |     | |     |                       |||||     | |     ^***   ^***                 | ||             | ||||||              | ||||| ||    |     | | | ||             |  |                    ^***         ^***           ||||      | |           
search RasMol script viewer Motif-ligand binding stats  TYR_PHOSPHO_SITE .. | |    |    |            |  |      | |      |******^              ||   | |   |     | |     |                       |||||     | |     |       | |                 | ||             | ||||||              | ||||| ||    |     | | | ||             |  |                                                ||||      | |           
search RasMol script viewer Motif-ligand binding stats  MYRISTYL .. | |    ^*****            |  |      | |      ||||                  ||   | |   |     | |     |                       |||||     | |     |       | |                 | ||             | ||||||              | |^*****^*****     | | | ||             |  |                                                ||||      | |           
search RasMol script viewer Motif-ligand binding stats  WD_REPEATS_1 .. | |                      |  |      | |      ||||                  ||   | |   ***************                       ||||***************       | |                 | |*************** ||||||              | ||||*************** | | ||             |  |                                                ||||      | |           
search RasMol script viewer Motif-ligand binding stats  betabulge .. | |                      |  |      | |      ||||                  **   | |         | |                             ||||      | |             | |                 | |                ||||||              | ||||                | | **             |  |                                                ||||      | |           
search RasMol script viewer Motif-ligand binding stats  betaturn .. | |                      |  |      | |      ||||                       | |         | |                             ||||      | |             | |                 | |                ||||||              ****||                | |                |  |                                                ||||      | |           
search RasMol script viewer Motif-ligand binding stats  gammaturn .. | |                      |  |      | |      ||||                       | |         | |                             ||||      | |             | |                 ***                ||||||                ||||                | |                |  |                                                ||||      | |           
search RasMol script viewer Motif-ligand binding stats  nest .. ***                      |  |      ***      ****                       | |         ***                             ****      ***             | |                                    ******                ****                ***                |  |                                                ****      ***           
search RasMol script viewer Motif-ligand binding stats  niche ..                          ****                ***                       ***                                                                   ***                                                           ***                                   ****                                                                        

chain U : 40S RIBOSOMAL PROTEIN S20
sec str:  .....eeeeeeee.hhhhhhhhhhhhhhhhhhh.......ee...eeeeeeee..........eeeeeeeeeeeeeeee.hhhhhhhhhhh......eeeee..
sequence :  ..SVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIA
seq num:  ..18        28        38        48        58        68        78        88        98        108         
search RasMol script viewer Motif-ligand binding stats  CAMP_PHOSPHO_SITE ..         | |               |    ||||      | | | | | |  | |                   |  |  **^*||             
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..         ^**               |    ||||      | ^** ^** |  | |                   |  |  | | ||             
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..                           |    ||||      |       | |  | |                   ^***  | | ||             
search RasMol script viewer Motif-ligand binding stats  RIBOSOMAL_S10 ..                           ****************       | |  | |                         | | ||             
search RasMol script viewer Motif-ligand binding stats  gammaturn ..                                |***              | |  ***                         | | ||             
search RasMol script viewer Motif-ligand binding stats  nest ..                                ***               | |                              | | ||             
search RasMol script viewer Motif-ligand binding stats  niche ..                                                  ***                              | ****             
search RasMol script viewer Motif-ligand binding stats  ststaple ..                                                                                   *****              

chain K : 40S RIBOSOMAL PROTEIN S10A
sec str:  .....hhhhhhhhhhhhhhhheee................hhhhhhhhhhhhhh...eeee......eeeehhhhhhhhhhhhh.............
sequence :  ..MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQT
seq num:  ..1         11        21        31        41        51        61        71        81        91   
search RasMol script viewer Motif-ligand binding stats  CAMP_PHOSPHO_SITE ..                 |||   **^*     | || |                     | |||||                 | |        |
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..                 |||   |        | || |                     | |||||                 | |        ^
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..                 |||   |        ^*** |                     | |||||                 | |         
search RasMol script viewer Motif-ligand binding stats  TYR_PHOSPHO_SITE ..                 |||   |          |  |                     | |||||                 | |         
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..                 |^*****          |  |                     | |||||                 | |         
search RasMol script viewer Motif-ligand binding stats  gammaturn ..                 | |              |  |                     ***||||                 ***         
search RasMol script viewer Motif-ligand binding stats  nest ..                 ***              |  |                        ****                             
search RasMol script viewer Motif-ligand binding stats  niche ..                                  ****                                                         

chain O : 40S RIBOSOMAL PROTEIN S14
sec str:  ............eee..eee....eee..............hhhhhh.......hhhhhhhhhhhhhhhhhhhh..eeeeeee............hhhhhhhhhhh...eeeeeee....................
sequence :  ..GPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDSTRRKGGRRGRRL
seq num:  ..18        28        38        48        58        68        78        88        98        108       118       128       138       148 
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..| |               | ^***    | ||||  | |  |  | ||||  |   |             | |          | ^***|   |    |     ||||     | |    || |  ||||||  
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..| |               |  |      | ^**|  | |  |  | ||||  |   |             | |          |   |||   |    |     |^**     | |    |^**  ||||||  
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..| |               ^***      | ^***  | |  |  | ||||  |   |             | |          |   |||   |    |     | |      | |    |     ||||||  
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..| |               |  |      | ||||  | |  |  | ||||  |   |             | |          ^*****|   ^*****     | |      | |    |     ^*****  
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..| |               |  |      | ||||  | |  |  | ||||  |   |             | |              | |        |     | |      | |    |     ^***|   
search RasMol script viewer Motif-ligand binding stats  RIBOSOMAL_S11 ..| |               |  |      | ||||  | |  |  | ||||  |   |             | |              | |        ***********************      ||||   
search RasMol script viewer Motif-ligand binding stats  asxmotif ..| |               |  |      *****|  | |  |  | ||||  |   |             | |              | |              | |      | |           ||||   
search RasMol script viewer Motif-ligand binding stats  asxturn ..| |               |  |      ***| |  | |  |  | ||||  |   |             | |              | |              | |      | |           ||||   
search RasMol script viewer Motif-ligand binding stats  betaturn ..| |               |  |      **** |  | |  |  | |||****   |             | |              | |              | |      | |           ||||   
search RasMol script viewer Motif-ligand binding stats  gammaturn ..***               |  |         | |  | |  |  | ||||  |   |             | |              | |              | |      | |           ***|   
search RasMol script viewer Motif-ligand binding stats  nest ..                  |  |         | |  ***  |  | ****  |   |             ***              ***              ***      | |            ***   
search RasMol script viewer Motif-ligand binding stats  niche ..                  ****         ***       ****    ****   |                                                        ***                  
search RasMol script viewer Motif-ligand binding stats  stmotif ..                                                    *****                                                                             

chain X : 40S RIBOSOMAL PROTEIN S23
sec str:  ..........hhhhhhhhhhhhh..hhhhhhhhhhhhhhh........eeeeeeeee.............eeeeee.....eeeee.....hhhhhh...eeeeee...............eeeeee...hhhhhhhh.......
sequence :  ..MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131          
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..   | |  | |         |  |  ||   |||||  | | |    |           |      | |       | ||||       | |  |  |      |||||               | ^***    ||||     
search RasMol script viewer Motif-ligand binding stats  CAMP_PHOSPHO_SITE ..   | |  | |         |  |  ||   |||||  | | |    |           |      | |       | **^*       | |  |  |      |||||               | |||     ||||     
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..   | |  ^**         |  |  ||   |||||  | | |    |           |      | |       | ||         | |  |  |      |||||               | |||     ||||     
search RasMol script viewer Motif-ligand binding stats  TYR_PHOSPHO_SITE ..   | |  | |         ******^|   |||||  | | |    |           |      | |       | ||         | |  |  |      |||||               | |||     ||||     
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..   | ^*****         |  |   |   |||||  | | ^*****           |      | |       | ||         | |  |  |      |||||               | |||     ||||     
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..   | |  |           |  |   |   |||||  | |                  |      | |       ^***         | |  |  |      ^***|               | |||     ||||     
search RasMol script viewer Motif-ligand binding stats  RIBOSOMAL_S12 ..   | |  |           |  |   |   |||||  | |                  ******** |       | |          | |  |  |      |||||               | |||     ||||     
search RasMol script viewer Motif-ligand binding stats  asxmotif ..   | |  |           |  *****   |||||  | |                         | |       | |          | |  |  |      |||||               | |||     ||||     
search RasMol script viewer Motif-ligand binding stats  betaturn ..   | |  |           |  |       |||||  | |                         | |       | |          | |  ****      |||||               ****|     ||||     
search RasMol script viewer Motif-ligand binding stats  nest ..   | |  |           |  |       ****|  | |                         ***       ***          ***  |  |      *****                 ***     ****     
search RasMol script viewer Motif-ligand binding stats  niche ..   ***  |           ****           ******                                                     ****                                             
search RasMol script viewer Motif-ligand binding stats  ststaple ..   ******                                                                                                                                      

chain M : 40S RIBOSOMAL PROTEIN S12
sec str:  ...hhhhhhhhhhhhhhh.......hhhhhhhh................hhhhhhhhhh...........hhhhhhh..............................hhhhhhhhhhhh..
sequence :  ..INTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALDVVKDHLRQNS
seq num:  ..21        31        41        51        61        71        81        91        101       111       121       131      
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE .. | |          | |    |  |      | |       |  |  |  |      | |       ^**                  | |                            
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE .. | |          | |    |  |      | |       ^***  |  |      | |                            | |                            
search RasMol script viewer Motif-ligand binding stats  MYRISTYL .. | |          | ^*****  |      | |             |  |      | |                            | |                            
search RasMol script viewer Motif-ligand binding stats  RIBOSOMAL_S12E .. | *******************  |      | |             |  |      | |                            | |                            
search RasMol script viewer Motif-ligand binding stats  betaturn .. | |          | |    ****      | |             ****      | |                            | |                            
search RasMol script viewer Motif-ligand binding stats  nest .. ***          ***              ***                       | |                            ***                            
search RasMol script viewer Motif-ligand binding stats  niche ..                               ***                       ***                                                           

chain S : 40S RIBOSOMAL PROTEIN S18
sec str:  .........eee..eee....hhhhhhhhh......hhhhhhhhh...........hhhhhhhhhhhhhhhhhhh.hhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...............
sequence :  ..PEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRR
seq num:  ..6         16        26        36        46        56        66        76        86        96        106       116       126       136    
search RasMol script viewer Motif-ligand binding stats  CAMP_PHOSPHO_SITE ..         |  |  |  |  |  | ||  | **^*      | || |||  | |  ||   |   |    | | |  |   ||||   |   | || |            | | |        | | ||   | ||
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..         |  |  |  |  |  | ||  |  |        | || ^**  | |  ||   |   |    | | |  |   ||||   |   | || |            | ^**        | | ||   ^**|
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..         |  ^***  |  |  | ||  |  |        | ||  ||  | ^***|   |   |    | | |  |   ||||   |   | ^***            | | |        | | ||   |  |
search RasMol script viewer Motif-ligand binding stats  TYR_PHOSPHO_SITE ..         |  |  |  |  |  | ||  |  |        | ||  ||  | |   |   |   |    | | |  |   *******^   |  |              | | |        | | ||   |  |
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..         |  |  |  |  ^*****|  |  |        | ||  ||  | |   |   |   |    | | |  |   ||||       |  |              | | |        | | ||   |  |
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..         |  |  ^***     |  |  ^***        | ||  ||  | |   |   |   |    | | |  |   ||||       |  |              | | |        | | ||   ^***
search RasMol script viewer Motif-ligand binding stats  RIBOSOMAL_S13_1 ..         |  |  |  |     |  |              | ||  ||  | |   |   |   |    | | |  |   ||||       |  |              | | **************|   |   
search RasMol script viewer Motif-ligand binding stats  betaturn ..         ****  |  |     ****              | ||  ||  | |   |   |   |    | | |  |   ||||       ****              | | |        | | ||   |   
search RasMol script viewer Motif-ligand binding stats  nest ..         |  |  |  |     |  |              ***|  ||  | |   |   |   |    *** |  |   ***|                         *** |        | | ||   |   
search RasMol script viewer Motif-ligand binding stats  niche ..         ****  ****     ****                 ******** |   |   |   |        ****    ***                           | |        *****|   |   
search RasMol script viewer Motif-ligand binding stats  stmotif ..                                                      *****   |   |                                              | |             |   |   
search RasMol script viewer Motif-ligand binding stats  ststaple ..                                                              *****                                              | |             *****   
search RasMol script viewer Motif-ligand binding stats  stturn ..                                                                                                                 ***                     

chain d : 40S RIBOSOMAL PROTEIN S29
sec str:  ....................................hhhhhhhhh.........
sequence :  ..TLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD
seq num:  ..5         15        25        35        45          
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..       | |  |    | |^**  |    ||||||   ||  |        
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..       | |  ^***** | ||  |    ^*****   ||  |        
search RasMol script viewer Motif-ligand binding stats  RIBOSOMAL_S14 ..       | |       ***********************|  |        
search RasMol script viewer Motif-ligand binding stats  gammaturn ..       ***         | ||  |    |||||     |  |        
search RasMol script viewer Motif-ligand binding stats  nest ..                   ***|  |    *****     |  |        
search RasMol script viewer Motif-ligand binding stats  niche ..                      ****              ****        

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