spacer

CAPRI: Critical Assessment of PRediction of Interactions

Community wide experiment on the comparative evaluation of protein-protein docking for structure prediction

Hosted By EMBL/EBI-PDBe Group

We are announcing the imminent launch of CAPRI Round 40.

This Round offers one target: T125.

Detailed target information will be available when the prediction Round opens. T125 is offered, by Dr. Ondrej Vanrk, Charles University in Prague, is a challenging human hetero-hexamer of the extracellular domain of LLT1 (Q9UHP7), with the extracellular domain of its inhibitor NKR-P1 (Q12918).
Please note that we are now asking predictors to submit up to 100 models directly to the EBI CAPRI website at the date of the predictor submission deadline. For targets where template-based modeling/docking is used, predictors are highly encouraged to submit as many models as possible.

Therefore, the step of separately uploading models for the scoring challenge to the CNRS/Lille website is eliminated.

Note also, that the first 10 models of the submitted set will be considered as the 10 best models to be evaluated as predictor models have been in the past, except that from now on the model ranking will be evaluated as well.

As previously, the (larger) set of submitted models will be used to generate the datasets for scoring challenge. Those will still be made available from the CNRS/Lille site for this scoring Round. The CNRS/Lille site is also where the scoring submission has to be deposited.



Documentation and Targets Round 40

  • Jun 16 - registration begins
Target T125
  • June 26 - prediction Round opens
  • June 28 - deadline for server submissions
  • July 17 - deadline for submitting predictions
  • July 19 - scoring Round set available
  • July 24 - scoring Round submission deadline




SCORERS

Scorers can download the server set of submissions from
http://cb.iri.univ-lille1.fr/capri/ using the same login user/password as distributed for Capri round40. Full details and deadlines are given on this site.


Email Problems or Queries to Sameer Velankar

spacer
spacer