Data collection: PaxDb Organism

General information

Recommended name PaxDb Organism
Description PaxDb is a resource dedicated to integrating information on absolute protein abundance levels across different organisms. Publicly available experimental data are mapped onto a common namespace and, in the case of tandem mass spectrometry data, re-processed using a standardized spectral counting pipeline. Data sets are scored and ranked to assess consistency against externally provided protein-network information. PaxDb provides whole-organism data as well as tissue-resolved data, for numerous proteins. This collection references protein abundance information by species.
Identifier pattern^\d+$
Registry identifierMIR:00000488

Identification schemes

Namespace paxdb.organism
URI http://identifiers.org/paxdb.organism/
Alternative URI schemes  
  • urn:miriam:paxdb.organism

Physical locations (resources)

Resource
MIR:00100624
Description PaxDb v3 at University of Zurich
Access URL http://pax-db.org/#!species/$id  [Example: 9606]
Institution Institute of Molecular Life Sciences, University of Zurich, Zurich, Switzerland
Website http://pax-db.org/

References