Data collection: HSSP

General information

Recommended name HSSP
Alternative name(s)
  • Homology-derived Structure of Proteins
Description HSSP (homology-derived structures of proteins) is a derived database merging structural (2-D and 3-D) and sequence information (1-D). For each protein of known 3D structure from the Protein Data Bank, the database has a file with all sequence homologues, properly aligned to the PDB protein.
Identifier pattern^\w{4}$
Registry identifierMIR:00000215

Identification schemes

Namespace hssp
URI http://identifiers.org/hssp/
Alternative URI schemes  
  • urn:miriam:hssp

Physical locations (resources)

Resource
MIR:00100458
Description HSSP at CMBI
Access URL ftp://ftp.cmbi.ru.nl/pub/molbio/data/hssp/$id.hssp.bz2  [Example: 102l]
Institution Nijmegen Centre for Molecular Life Sciences, CMBI, Nijmegen, Holland
Website ftp://ftp.cmbi.ru.nl/pub/molbio/data/hssp/
Resource
MIR:00100274
Description HSSP at EMBL
Access URL ftp://ftp.embl-heidelberg.de/pub/databases/protein_extras/hssp/$id.hssp.bz2  [Example: 102l]
Institution Protein Design Group, European Molecular Biology Laboratory, Heidelberg, Germany
Website http://swift.cmbi.kun.nl/swift/hssp/

References