Data collection: Nucleotide Sequence Database

General information

Recommended name Nucleotide Sequence Database
Alternative name(s)
  • International Nucleotide Sequence Database Collaboration
  • INSDC
Description The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.
Identifier pattern^([A-Z]\d{5}|[A-Z]{2}\d{6}|[A-Z]{4}\d{8}|[A-J][A-Z]{2}\d{5})(\.\d+)?$
Registry identifierMIR:00000029

Identification schemes

Namespace insdc
URI http://identifiers.org/insdc/
Alternative URI schemes  
  • urn:miriam:insdc
Deprecated URI scheme(s)   Display/Hide deprecated URI scheme(s)

Physical locations (resources)

Resource
MIR:00100490
Description INSDC through Nucleotide database at NCBI
Access URL http://www.ncbi.nlm.nih.gov/nuccore/$id  [Example: X58356]
Institution National Center for Biotechnology Information, Bethesda, Maryland, USA
Website http://www.ncbi.nlm.nih.gov/nuccore/
Resource
MIR:00100487
Description INSDC through European Nucleotide Archive (ENA)
Access URL http://www.ebi.ac.uk/ena/data/view/$id  [Example: X58356]
Institution European Molecular Biology Laboratory (EMBL-EBI), United Kingdom
Website http://www.ebi.ac.uk/ena/
Resource
MIR:00100049
Description INSDC through GenBank
Access URL http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=$id  [Example: X58356]
Institution National Center for Biotechnology Information, USA
Website http://www.ncbi.nlm.nih.gov/Genbank/
Resource
MIR:00100066
Description INSDC through DDBJ
Access URL http://getentry.ddbj.nig.ac.jp/getentry?database=ddbj&accession_number=$id  [Example: X58356]
Institution DNA Data Bank of Japan, Mishima, Shizuoka, Japan
Website http://www.ddbj.nig.ac.jp/
Deprecated physical locations   Display/Hide deprecated resources

References