Data collection: Pfam

General information

Recommended name Pfam
Alternative name(s)
  • Protein Family Database
Description The Pfam database contains information about protein domains and families. For each entry a protein sequence alignment and a Hidden Markov Model is stored.
Identifier pattern^PF\d{5}$
Registry identifierMIR:00000028

Identification schemes

Namespace pfam
URI http://identifiers.org/pfam/
Alternative URI schemes  
  • urn:miriam:pfam
Deprecated URI scheme(s)   Display/Hide deprecated URI scheme(s)

Physical locations (resources)

Resource
MIR:00100685
Description Pfam at EMBL-EBI
Access URL http://pfam.xfam.org/family/$id  [Example: PF01234]
Institution EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, UK
Website http://pfam.xfam.org/
Deprecated physical locations   Display/Hide deprecated resources

References