Data collection: Gene Ontology

General information

Recommended name Gene Ontology
Alternative name(s)
  • GO
Description The Gene Ontology project provides a controlled vocabulary to describe gene and gene product attributes in any organism.
Identifier pattern^GO:\d{7}$
Registry identifierMIR:00000022

Identification schemes

Namespace go
URI http://identifiers.org/go/
Alternative URI schemes  
  • http://purl.obolibrary.org/obo/
  • http://bio2rdf.org/
  • urn:miriam:go
Deprecated URI scheme(s)   Display/Hide deprecated URI scheme(s)

Physical locations (resources)

Resource
MIR:00100675
Description GO through OLS
Access URL http://www.ebi.ac.uk/ontology-lookup/?termId=$id  [Example: GO:0006915]
Institution European Bioinformatics Institute, Hinxton, Cambridge, UK
Website http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=GO
Resource
MIR:00100012
Description QuickGO (Gene Ontology browser)
Access URL http://www.ebi.ac.uk/QuickGO/GTerm?id=$id  [Example: GO:0006915]
Institution European Bioinformatics Institute, United Kingdom
Website http://www.ebi.ac.uk/QuickGO/
Resource
MIR:00100015
Description GO Browser
Access URL http://www.informatics.jax.org/searches/GO.cgi?id=$id  [Example: GO:0006915]
Institution The Jackson Laboratory, USA
Website http://www.informatics.jax.org/searches/GO_form.shtml
primary Resource
MIR:00100013
Description AmiGO
Access URL http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=$id  [Example: GO:0006915]
Institution The Gene Ontology Consortium, USA
Website http://amigo.geneontology.org/
Resource
MIR:00100585
Description GO through PANTHER
Access URL http://www.pantherdb.org/panther/category.do?categoryAcc=$id  [Example: GO:0000003]
Institution Keck School of Medicine, University of Southern California, USA
Website http://www.pantherdb.org/
Resource
MIR:00100237
Description GO through BioPortal
Access URL http://purl.bioontology.org/ontology/GO/$id  [Example: GO:0006915]
Institution National Center for Biomedical Ontology, Stanford, USA
Website http://bioportal.bioontology.org/ontologies/GO
Resource
MIR:00100659
Description GO through Amigo2 (prototype)
Access URL http://amigo2.berkeleybop.org/cgi-bin/amigo2/amigo/term/$id  [Example: GO:0006915]
Institution Berkeley Bioinformatics Open-source Projects, Lawrence Berkeley National Lab, Berkeley, California, USA
Website http://amigo2.berkeleybop.org/cgi-bin/amigo2/amigo/
Deprecated physical locations   Display/Hide deprecated resources

References