Data collection: Protein Data Bank

General information

Recommended name Protein Data Bank
Alternative name(s)
  • PDB
Description The Protein Data Bank is the single worldwide archive of structural data of biological macromolecules.
Identifier pattern^[0-9][A-Za-z0-9]{3}$
Registry identifierMIR:00000020

Identification schemes

Namespace pdb
URI http://identifiers.org/pdb/
Alternative URI schemes  
  • urn:miriam:pdb
Deprecated URI scheme(s)   Display/Hide deprecated URI scheme(s)

Physical locations (resources)

Resource
MIR:00100166
Description Protein Databank through PDBsum
Access URL http://www.ebi.ac.uk/pdbsum/$id  [Example: 2gc4]
Institution European Bioinformatics Institute, UK
Website http://www.ebi.ac.uk/pdbsum/
Resource
MIR:00100165
Description Protein Data Bank Japan (PDBj)
Access URL http://service.pdbj.org/mine/summary/$id  [Example: 2gc4]
Institution Institute for Protein Research, Osaka University, Japan
Website http://www.pdbj.org/
Resource
MIR:00100096
Description Proteopedia
Access URL http://proteopedia.org/wiki/index.php/$id  [Example: 2gc4]
Institution Weizmann Institute of Science, Israel
Website http://www.proteopedia.org/
Resource
MIR:00100029
Description RCSB PDB
Access URL http://www.rcsb.org/pdb/explore/explore.do?structureId=$id  [Example: 2gc4]
Institution Rutgers, The State University of New Jersey, USA
Website http://www.pdb.org/
Resource
MIR:00100037
Description Protein Databank in Europe (PDBe)
Access URL http://www.pdbe.org/$id  [Example: 2gc4]
Institution European Bioinformatics Institute, United Kingdom
Website http://www.pdbe.org/

References