ArrayExpress New Interface: A new ArrayExpress user interface has been released with improved response times including support for web browsers Safari and Opera. Try it now from here.
29 May 2008
ArrayExpress Ontology - EFO: The ArrayExpress Team have developed an application ontology of sample and factor annotations - the EFO. The ontology is used to map user submitted annotations during curation, to improve query performance and to integrate ArrayExpress data with publicly available ontologies, including the Disease Ontology, CHEBI, and the Cell Type Ontology. The ontology is publicly available from the EBI's Ontology Lookup Service - OLS and is released every two months. The EFO can be used by any database storing sample properties or experimental variables and we invite comment and term submission from any interested user
.
29 May 2008
UHT sequencing transcriptomics data in ArrayExpress: ArrayExpress now stores high ultra throughput sequencing data and is
compliant with the MINSEQE
standard. Submissions are accepted and downloadable in
MAGE-TAB format.
29 May 2008
High resolution analysis of the S. pombe transcriptome: Wilhelm et al. (Nature, 2008), have analysed the S.pombe transcriptome at single nucleotide
resolution using Illumina
sequencing technology and tiling arrays. ArrayExpress has made available this data.
28 May 2008
ArrayExpress Atlas Beta: Explore in which conditions a gene is expressed or which genes are differentially expressed in a particular condition, tissue, cell type, etc. Try it now from here.
