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Highlights
Latest News
  • New Atlas article is a featured publication in NAR
    23 Nov 2009

    Featured Articles highlight the best papers published in NAR. These articles are chosen by the Executive Editors on the recommendation of Editorial Board Members and Referees. They represent the top 5% of papers in terms of originality, significance and scientific excellence. Read all about it.

  • Student Project Placement
    04 Oct 2009

    An exciting student project placement is available to develop an interface for the Human Gene Expression Map...more details.

  • Gene Expression Atlas - Release 1.1.0
    16 Jun 2009

    New features include an ontology driven interface using EFO, newly added datasets, expression profile similarity searching and top 10 variable genes per experiment...try them now.

  • Bioinformatician with ArrayExpress
    04 Jun 2009

    A new job position working as a bioinformatician with ArrayExpress has opened up... more details.

  • News Archive
FAQ
Microarray FAQ...more
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Microarray Informatics at the EBI

About Our Group

Query ArrayExpress:

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Databases

Archive
Public domain functional genomics data
Atlas
A database of gene expression in different biological conditions
BII
A database for multi- 'omics studies - beta
SAIL
Samples and phenotypes available in biobanks and cohorts - beta

Tools

Expression Profiler
Online microarray data analysis tool with data links to ArrayExpress
EBI R workbench
Online access to R/Bioconductor at EBI - Coming soon

Standards and ontologies

MIAME
Minimum Information About a Microarray Experiment
MINSEQE
Minimum Information about a high-throughput SeQuencing Experiment
MAGE-TAB
MicroArray and Gene Expression Tabular
ISA-TAB
Investigation, Study, Assay tab-delimited format
MIBBI
Minimum Information for Biological and Biomedical Investigations
EFO
An ontology of variables in functional genomics experiments
OBI
An Ontology for Biomedical Investigations

Software

SIMBioMS
A System for Information Management in BioMedical Studies
MAGE Tabulator
A spreadsheet format for submitting experiments to ArrayExpress
Bioconductor Package
Build Bioconductor structures with ArrayExpress data
ISA Creator
A spreadsheet tool for submitting studies to BII
MIAMExpress
Online web based tool for submission to ArrayExpress

Projects

ArrayExpress
Medical Informatics
Quality Metrics
Research
Training
Other Projects

Other Information

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