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EBIGroupsLiterature ServicesPublications

Literature Services - Publications

The following is a list of publications for the Literature Services.

2008



Nikolov N., Stoehr P. (2008)
Harvesting Needed To Maintain Scientific Literature
Online Joint ACM/IEEE Conference on Digital Libraries (JCDL 2008)
More Info

Nikolov N., Stoehr P. (2008)
Integrating Biomedical Publications With Existing Metadata.
21st IEEE International Symposium on Computer-Based Medical Systems (CBMS 2008)
abstract

2007



Nikolay N. (2008)
A new look into data warehouse modelling.
9th International Conference on Enterprise Information Systems. (ICEIS 2007)
abstract

Nikolov N., Stoehr P., Zhu W., Rijnbeek M., Pillai S. (2007)
CiteXtract - extracting citation data from biomedical literature.
20th IEEE International Symposium on Computer-Based Medical Systems (CBMS 07): 12-14.
more info

Rebholz-Schuhmann D., Kirsch H., Arregui M., Gaudan S., Riethoven M. & Stoehr P. (2007)
EBIMed - text crunching to gather facts for proteins from Medline.
Bioinformatics 23(2): e237-44.
abstract full-text PDF

Kulikova T., Akhtar R., Aldebert P., Althorpe N., Andersson M., Baldwin A., Bates K., Bhattacharyya S., Bower L., Browne P., Castro M., Cochrane G., Duggan K., Eberhardt R., Faruque N., Hoad G., Kanz C., Lee C., Leinonen R., Lin Q., Lombard V., Lopez R., Lorenc D., McWilliam H., Mukherjee G., Nardone F., Pastor MP., Plaister S., Sobhany S., Stoehr P., Vaughan R., Wu D., Zhu W., Apweiler R. (2007)
EMBL Nucleotide Sequence Database in 2006.
Nucleic Acids Research 35: D16-D20.
abstract full-text PDF

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2006



Rebholz-Schuhmann D., Kirsch H., Arregui M., Gaudan S., Rynbeek M., Stoehr P. (2006)
Protein annotation by EBIMed.
Nature Biotechnology 24: 902-903.
abstract full-text PDF

Cochrane G., Aldebert P., Althorpe N., Andersson M., Baker W., Baldwin A., Bates K., Bhattacharyya S., Browne P., van den Broek A., Castro M., Duggan K., Eberhardt R., Faruque N., Gamble J., Kanz C., Kulikova T., Lee C., Leinonen R., Lin Q., Lombard V., Lopez R., McHale M., McWilliam H., Mukherjee G., Nardone F., Pastor M.P., Sobhany S., Stoehr P., Tzouvara K., Vaughan R., Wu D., Zhu W., Apweiler R. (2006)
EMBL Nucleotide Sequence Database: developments in 2005.
Nucleic Acids Research 34: D10-D15.
abstract full-text PDF

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2005



Pillai S., Silventoinen V., Kallio K., Senger M., Sobhany S., Tate J., Velankar S., Golovin A., Henrick K., Rice P., Stoehr P., Lopez R. (2005)
SOAP-based services provided by the European Bioinformatics Institute.
Nucleic Acids Research 33: W25-W28.
abstract full-text PDF

Robinson J., Waller M.J., Stoehr P. and Marsh S.G.E. (2005)
IPD- The Immuno Polymorphism Database.
Nucleic Acids Research 33: D523-D526.
abstract full-text PDF

Kanz C., Aldebert P., Althorpe N., Baker W., Baldwin A., Bates K., Browne P., van den Broek A., Castro M., Cochrane G., Duggan K., Eberhardt R., Faruque N., Gamble J., Garcia Diez F., Harte N., Kulikova T., Lin Q., Lombard V., Lopez R., Mancuso R., McHale M., Nardone F., Silventoinen V., Sobhany S., Stoehr P., Tuli M.A., Tzouvara K., Vaughan R., Wu D., Zhu W. and Apweiler R. (2005)
The EMBL Nucleotide Sequence Database.
Nucleic Acids Research 33: D29-D33.
abstract full-text PDF

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2004



Kulikova T., Aldebert P., Althorpe N., Baker W., Bates K., Browne P., van den Broek A., Cochrane G., Duggan K., Eberhardt R., Faruque N., Garcia-Pastor M., Harte N., Kanz C., Leinonen R., Lin Q., Lombard V., Lopez R., Mancuso R., McHale M., Nardone F., Silventoinen V., Stoehr P., Stoesser G., Tuli M.A., Tzouvara K., Vaughan R., Wu D., Zhu W. and Apweiler R. (2004)
The EMBL Nucleotide Sequence Database.
Nucleic Acids Research 32: D27-D30.
abstract full-text PDF

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2003



Robinson J., Waller M.J., Parham P., de Groot N., Bontrop R., Kennedy L.J., Stoehr P. and Marsh S.G.E. (2003)
IMGT/HLA and IMGT/MHC: sequence databases for the study of the major histocompatibility complex.
Nucleic Acids Research 31(1): 311-314.
abstract full-text PDF

Brooksbank C., Camon E., Harris M. A., Magrane M., Martin M., Mulder N., O\'Donovan C., Parkinson H., Tuli M., Apweiler R., Birney E., Brazma A., Henrick K., Lopez R. , Stoesser G., Stoehr P. and Cameron G. (2003)
The European Bioinformatics Institute's data resources.
Nucleic Acids Research 31: 43-50.
abstract full-text PDF

Stoesser G., Baker W., van den Broek A., Garcia-Pastor M., Kanz C., Kulikova T., Leinonen R., Lin Q., Lombard V., Lopez R., Mancuso R., Nardone F., Stoehr P., Tuli M., Tzouvara K. and Vaughan R. (2003)
The EMBL Nucleotide Sequence Database: major new developments.
Nucleic Acids Research 31(1): 17-22.
abstract full-text PDF

Leinonen R., Nardone F., Oyewole O., Redaschi N. and Stoehr P. (2003)
The EMBL sequence version archive.
Bioinformatics 19(14): 1861-1862.
abstract full-text PDF

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