IPD - MHC Database

Swine (SLA) Class I Haplotype Assignments

Hp-	Breed	Previous Designation	SLA-1	SLA-3	SLA-2	SLA-6
1a.0	Large White	H01	0101	0101	0101	0101
1b.0	Large White	H28	01rh28	01rh28	0101	ND
2.0	NIH, Sinclair, Hanford	a, b, H10	0201, 0701	null	0201	w02sa01
3.0	NIH	c, H59	null	0301	0301	0103
4a.0	NIH, Duroc	d, H04	0401	0401	0401	0102
4b.0	Yucatan	x	0401	0401	040201	0104
4c.0	Meishan	K	0401	0401	0401	0104
5.0	Yucatan	w	0401	05sw01	w08sw01	null
6.0	Yucatan	y	08sy01	0601	05sy01	03sy01
7.0	Yucatan	z	0801	0701	0502	0101
8.0	Westran	None	02we02, 04we01	0302	07we01	01we01
9.0	Sinclair, Hanford	a	0601	0501	0601	ND
10.0	Sinclair	c	0501	hm22	0302	ND
11.0	Sinclair	d	0101, w09sm09	0701sm19	0501	ND
12.0	Hanford	e	08sm08, w09sm09	0502	10sm01	ND
13.0	Hanford, Duroc	f, d2	w10sm21	0401	w13sm20	ND
14.0	Large White	H12	0102	01rh12	07rh12	ND
15.0	Large White	H34	0102	07rh34	05rh34	ND
16.0	Clawn	c1	0401	0602	w09an02	ND
17.0	Clawn	c2	Blank	03an02	06an03	ND
18.0	Meishan	M	0401	0304	06me01	0102
19.0	Meishan	N	08ms05, 13ms21	0602	w09sn01	0105
20.0	Meishan	L	w10cs01, cs02	0101	110102	0103
21.0	Commercial breeds	H03	rh03	0601	05rh03	ND
25.0	Hampshire (LLC-PK1 porcine cell line)	None	1101	0302	0701	ND
27.0	Duroc	d1	06an04, 08an03	0101	0102	ND
56.0	Korean native pig	None	11jh01	0303	jh01	w04jh01
59.0	Korean native pig	None	11jh02	0503	jh02	0102
60.0	Duroc	d2	an02	0502	1002	ND

ND = specific allele at this locus not yet defined.

Swine (SLA) Class II Haplotype Assignments

Hp-	Breed	Previous Designation	DRA	DRB	DQA	DQB1
0.1	Large White, Korean native pig	H01	010101	0101	0101	0101
0.2	NIH, Sinclair, Hanford	a, b	010101	0201	0201	0201
0.3	NIH	c	0201	0301	0102	0301
0.4	NIH	d	010102	0201	020201	040101
0.5	Yucatan	x	020301	0501	020202	0201
0.6	Yucatan	w	020203	0501	0103	0801
0.7	Yucatan	y	0203my01	0601	01my01	0601
0.8	Yucatan	z	010101	0801	0203	0202
0.9	Westran	None	0101we01	0201	03we01	0402we01
0.10	Sinclair, Hanford	a	ND	0401	ND	0801
0.11	Sinclair	c	020202	0901	ND	0402
0.12	Sinclair	d	020201	0602	0301	0701
0.13	Hanford, Duroc	e, d2	ND	0403	ND	0303
0.14	Meishan	M, K	010103	0901	0301	0801
0.15a	Meishan	N	0201	0401	0203	0201
0.15b	Banna	None	020301	0402	020202	0202
0.16	Clawn	c1	ND	11ac21	ND	0601
0.17	Clawn	c2	ND	0801	ND	0501
0.18	Meishan	L	010103	1401	02cs01	040102
0.25	Hampshire (LLC-PK1 porcine cell line)	None	ND	1301	ND	0901
0.30	Korean native pig, Duroc	d1	020202	1101	02jh01	0503

ND = specific allele at this locus not yet defined.
Note: DRA, DQA Alleles not determined in the Duroc pigs

Further Information

For more information on the SLA nomenclature please contact SHo@giftoflifemichigan.org. For information regarding the website and technical issues please contact IPD Support