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IPD-MHC Database

Swine (SLA) Class I Haplotype Assignments


Hp- Breed Previous Designation SLA-1 SLA-3 SLA-2 SLA-6
1a.0 Large White H01 0101 0101 0101 0101
1b.0 Large White H28 01rh28 01rh28 0101 ND
2.0 NIH, Sinclair, Hanford a, b, H10 0201, 0701 null 0201 w02sa01
3.0 NIH c, H59 null 0301 0301 0103
4a.0 NIH, Duroc d, H04 0401 0401 0401 0102
4b.0 Yucatan x 0401 0401 040201 0104
4c.0 Meishan K 0401 0401 0401 0104
5.0 Yucatan w 0401 05sw01 w08sw01 null
6.0 Yucatan y 08sy01 0601 05sy01 03sy01
7.0 Yucatan z 0801 0701 0502 0101
8.0 Westran None 02we02, 04we01 0302 07we01 01we01
9.0 Sinclair, Hanford a 0601 0501 0601 ND
10.0 Sinclair c 0501 hm22 0302 ND
11.0 Sinclair d 0101, w09sm09 0701sm19 0501 ND
12.0 Hanford e 08sm08, w09sm09 0502 10sm01 ND
13.0 Hanford, Duroc f, d2 w10sm21 0401 w13sm20 ND
14.0 Large White H12 0102 01rh12 07rh12 ND
15.0 Large White H34 0102 07rh34 05rh34 ND
16.0 Clawn c1 0401 0602 w09an02 ND
17.0 Clawn c2 Blank 03an02 06an03 ND
18.0 Meishan M 0401 0304 06me01 0102
19.0 Meishan N 08ms05, 13ms21 0602 w09sn01 0105
20.0 Meishan L w10cs01, cs02 0101 110102 0103
21.0 Commercial breeds H03 rh03 0601 05rh03 ND
25.0 Hampshire (LLC-PK1 porcine cell line) None 1101 0302 0701 ND
27.0 Duroc d1 06an04, 08an03 0101 0102 ND
56.0 Korean native pig None 11jh01 0303 jh01 w04jh01
59.0 Korean native pig None 11jh02 0503 jh02 0102
60.0 Duroc d2 an02 0502 1002 ND

ND = specific allele at this locus not yet defined.

Swine (SLA) Class II Haplotype Assignments


Hp- Breed Previous Designation DRA DRB DQA DQB1
0.1 Large White, Korean native pig H01 010101 0101 0101 0101
0.2 NIH, Sinclair, Hanford a, b 010101 0201 0201 0201
0.3 NIH c 0201 0301 0102 0301
0.4 NIH d 010102 0201 020201 040101
0.5 Yucatan x 020301 0501 020202 0201
0.6 Yucatan w 020203 0501 0103 0801
0.7 Yucatan y 0203my01 0601 01my01 0601
0.8 Yucatan z 010101 0801 0203 0202
0.9 Westran None 0101we01 0201 03we01 0402we01
0.10 Sinclair, Hanford a ND 0401 ND 0801
0.11 Sinclair c 020202 0901 ND 0402
0.12 Sinclair d 020201 0602 0301 0701
0.13 Hanford, Duroc e, d2 ND 0403 ND 0303
0.14 Meishan M, K 010103 0901 0301 0801
0.15a Meishan N 0201 0401 0203 0201
0.15b Banna None 020301 0402 020202 0202
0.16 Clawn c1 ND 11ac21 ND 0601
0.17 Clawn c2 ND 0801 ND 0501
0.18 Meishan L 010103 1401 02cs01 040102
0.25 Hampshire (LLC-PK1 porcine cell line) None ND 1301 ND 0901
0.30 Korean native pig, Duroc d1 020202 1101 02jh01 0503

ND = specific allele at this locus not yet defined.
Note: DRA, DQA Alleles not determined in the Duroc pigs

Further Information

For more information on the SLA nomenclature please contact SHo@giftoflifemichigan.org. For information regarding the website and technical issues please contact IPD Support

 


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