IPD-MHC Non-Human Primates (NHP)
Welcome to the NHP database, a specialist database for the Major Histocompatibility Complex genes of Non-Human Primates. The database includes Apes and both Old World and New World monkeys. It presently covers over 40 different primate species and is subject to quality control.
- The database is undergoing a major rebuild to cope with the updated information and to streamline the release process. As a consequence the on-line Release 1.10.0 is postponed.
- The following table (please click to download) gives an overview on the data available on the website and indicates for which data updates are available.
- Updated alignments are available via the download tool of the website (ftp.ebi.ac.uk/pub/databases/ipd/mhc/nhp).
Should the need for an overview of alleles of a certain gene arise, please feel free to contact us. We can provide custom made tables displaying the most recent information.
We apologize for the inconvenience that this may cause.
Nel Otting and Natasja de Groot
For allele designation the database uses the 2010 nomenclature rules described by the WHO Nomenclature Committee for Factors of the HLA System.
The alignments used have been curated by;
Natasja de Groot, Nel Otting and Ronald Bontrop
Biomedical Primate Research Centre
Lange Kleiweg 139
Tel: +31 15 284 2699
Fax: +31 15 284 3999
Email: Natasja de Groot (firstname.lastname@example.org)
We hope you will cite the IPD-MHC NHP database whenever you publish your sequences. When citing the database you can use the following articles.
Robinson J, Waller MJ, Stoehr P, Marsh SGE
IPD-the Immuno Polymorphism Database
Nucleic Acids Research (2013) 41:D1222-7
(Download PDF File)
de Groot NG, Otting N, Robinson J, Blancher A, Lafont BAP, Marsh SGE, O'Connor DH, Shiina T, Walter L, Watkins DI, Bontrop RE
Nomenclature report on the major histocompatibility complex genes and alleles of Great Ape, Old and New World monkey species
Immunogenetics (2012), 64 (8): 615-631