InterPro results for type:binding_site

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Ureohydrolase, manganese-binding site (IPR020855) The ureohydrolase superfamily includes arginase , agmatinase , formiminoglutamase and proclavaminate amidinohydrolase . These enzymes share a 3-layer alpha-beta-alpha structure, a...

Adrenodoxin, iron-sulphur binding site (IPR018298) Adrenodoxin, putidaredoxin and terpredoxin are soluble 2Fe-2S iron-sulphur proteins that act as single electron carriers. They are a subgroup of the ferredoxin family of iron-sulp...

Pyridoxal-phosphate binding site (IPR021115) Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reacti...

Peptidase M10A, cysteine switch, zinc binding site (IPR021158) Over 70 metallopeptidase families have been identified to date. In these enzymes a divalent cation which is usually zinc, but may be cobalt, manganese or copper, activates the wat...

RNA polymerases, subunit N, zinc binding site (IPR020789) In eukaryotes, there are three different forms of DNA-dependent RNA polymerases transcribing different sets of genes. Each class of RNA polymerase is an assemblage of ten to twelv...

Manganese/iron superoxide dismutase, binding site (IPR019833) Superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to molecular oxygen. Their function is to destroy the radicals that are normally produced within cells ...

Endonuclease III, iron-sulphur binding site (IPR004035) Endonuclease III is a DNA repair enzyme which removes a number of damaged pyrimidines from DNA via its glycosylase activity and also cleaves the phosphodiester backbone at apurini...

Sigma-54 interaction domain, ATP-binding site 2 (IPR025943) Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor. These have a ...

Serine/threonine dehydratase, pyridoxal-phosphate-binding site (IPR000634) Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reacti...

6-phosphogluconate-binding site (IPR006184) 6-Phosphogluconate dehydrogenase (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of...