InterProScan sequence search

This form allows you to scan your sequence for matches against the InterPro protein signature databases, using InterProScan tool.
Enter or paste a protein sequence in FASTA format (complete or not - e.g. PMPIGSKERPTFFEIFKTRCNKADLGPISLN), with a maximum length of 40,000 amino acid long.
Please note that you can only scan one sequence at a time.

Analyse your protein sequence

Advanced options

Select the applications to run: Uncheck all Select all

Member databases
- Families, domains, sites & repeats

- Structural domains

Other sequence features

IDA search tool InterProScan is a sequence analysis application (nucleotide and protein sequences) that combines different protein signature recognition methods into one resource.
More about InterProScan.

Need some help?

If you need more info on the InterProScan sequence search, you can either look at the:
Documentation page
Online training course
or contact us directly with your question.