Release notes

Latest release note

v.62
InterPro 62.0
16th March 2017

Features include:

  • An update to GENE3D (4.1.0), PROSITE patterns (20.132), HAMAP (201701.18), PROSITE profiles (20.132).
  • Integration of 527 new methods from the CDD (133), Pfam (3), SUPERFAMILY (46), PROSITE profiles (36), PANTHER (139), CATH-Gene3D (23), HAMAP (81), SFLD (64) and ProDom (2) databases.

Previous release notes

Contents and coverage of InterPro 62.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 62.0 contains 29930 entries (last entry: IPR034768), representing:

InterPro cites 51421 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 4.1.0 2737 1198
CDD 3.14 11273 1526
HAMAP 201701.18 2160 2160
PANTHER 11.1 91538 5923
Pfam 30.0 16306 15710
PIRSF 3.01 3285 3222
PRINTS 42.0 2106 1986
ProDom 2006.1 1894 1131
PROSITE patterns 20.132 1309 1289
PROSITE profiles 20.132 1174 1142
SFLD 2 480 146
SMART 7.1 1312 1265
SUPERFAMILY 1.75 2019 1461
TIGRFAMs 15.0 4488 4450

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB2017_038075840071118703 (88.1%)64919649 (80.4%)
UniProtKB/TrEMBL2017_038020445970576370 (88.0%)64384952 (80.3%)
UniProtKB/Swiss-Prot2017_03553941542333 (97.9%)534697 (96.5%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 32178

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO