Release notes

Latest release note

v.60
InterPro 60.0
3rd November 2016

Features include:

  • New member database MobiDB Lite (1.0).
  • Residue annotation from the CDD and SFLD databases.
  • Integration of 107 new methods from the CDD (101) and PANTHER (6) databases.

Previous release notes

Contents and coverage of InterPro 60.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 60.0 contains 29700 entries (last entry: IPR034084), representing:

InterPro cites 50437 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.5.0 2626 1724
CDD 3.14 11273 1108
HAMAP 201605.11 2087 2081
PANTHER 10.0 95118 5406
Pfam 30.0 16306 15716
PIRSF 3.01 3285 3223
PRINTS 42.0 2106 1994
ProDom 2006.1 1894 1128
PROSITE patterns 20.119 1309 1290
PROSITE profiles 20.119 1136 1107
SFLD 1 480 17
SMART 7.1 1312 1265
SUPERFAMILY 1.75 2019 1413
TIGRFAMs 15.0 4488 4453

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB2016_107120904162082284 (87.2%)56843415 (79.8%)
UniProtKB/TrEMBL2016_107065615761541399 (87.1%)56310112 (79.7%)
UniProtKB/Swiss-Prot2016_10552884540885 (97.8%)533303 (96.5%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 32261

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO