Release notes

Latest release note

v.56
InterPro 56.0
18th February 2016

Features include:

  • An update to PROSITE patterns (20.119), PROSITE profiles (20.119).
  • Integration of 281 new methods from the SUPERFAMILY (1), PROSITE profiles (24) and PANTHER (256) databases.

Previous release notes

Contents and coverage of InterPro 56.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 56.0 contains 28926 entries (last entry: IPR033180), representing:

InterPro cites 47170 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.5.0 2626 1726
HAMAP 201511.02 2045 2037
PANTHER 10.0 95118 4925
PIRSF 3.01 3285 3223
PRINTS 42.0 2106 2003
PROSITE patterns 20.119 1309 1291
PROSITE profiles 20.119 1136 1109
Pfam 28.0 16230 15638
ProDom 2006.1 1894 1125
SMART 6.2 1008 996
SUPERFAMILY 1.75 2019 1405
TIGRFAMs 15.0 4488 4454

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB2016_026152204150822527 (82.6%)49180281 (79.9%)
UniProtKB/TrEMBL2016_026097148950287299 (82.5%)48649579 (79.8%)
UniProtKB/Swiss-Prot2016_02550552535228 (97.2%)530702 (96.4%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 31244

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO