Release notes

Latest release note

v.55
InterPro 55.0
10th December 2015

Features include:

  • An update to HAMAP (201511.02).
  • Integration of 399 new methods from the Pfam (273), SUPERFAMILY (23), PANTHER (48), CATH-Gene3D (11), HAMAP (43) and ProDom (1) databases.

Previous release notes

Contents and coverage of InterPro 55.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 55.0 contains 28678 entries (last entry: IPR032908), representing:

InterPro cites 46286 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.5.0 2626 1726
HAMAP 201511.02 2045 2036
PANTHER 10.0 95118 4670
PIRSF 3.01 3285 3223
PRINTS 42.0 2106 2004
PROSITE patterns 20.113 1308 1289
PROSITE profiles 20.113 1112 1085
Pfam 28.0 16230 15640
ProDom 2006.1 1894 1125
SMART 6.2 1008 996
SUPERFAMILY 1.75 2019 1404
TIGRFAMs 15.0 4488 4457

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB2015_125582079546014824 (82.4%)44502854 (79.7%)
UniProtKB/TrEMBL2015_125527067945480024 (82.3%)43972636 (79.6%)
UniProtKB/Swiss-Prot2015_12550116534800 (97.2%)530218 (96.4%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 30706

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO