Release notes

Latest release note

v.54
InterPro 54.0
15th October 2015

Features include:

  • An update to PANTHER (10.0).
  • Integration of 2138 new methods from the CATH-Gene3D (2), Pfam (1319), SUPERFAMILY (5), ProDom (7) and PANTHER (805) databases.

Previous release notes

Contents and coverage of InterPro 54.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 54.0 contains 28462 entries (last entry: IPR032671), representing:

InterPro cites 45879 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.5.0 2626 1716
HAMAP 201502.04 2001 1994
PANTHER 10.0 95118 4626
PIRSF 3.01 3285 3224
PRINTS 42.0 2106 2007
PROSITE patterns 20.113 1308 1289
PROSITE profiles 20.113 1112 1085
Pfam 28.0 16230 15374
ProDom 2006.1 1894 1125
SMART 6.2 1008 996
SUPERFAMILY 1.75 2019 1381
TIGRFAMs 15.0 4488 4461

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB2015_105333324743989070 (82.5%)42343750 (79.4%)
UniProtKB/TrEMBL2015_105278360143454702 (82.3%)41814247 (79.2%)
UniProtKB/Swiss-Prot2015_10549646534368 (97.2%)529503 (96.3%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 30580

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO