Release notes

Latest release note

v.53
InterPro 53.0
23rd July 2015

Features include:

  • An update to Pfam (28.0).
  • Integration of 166 new methods from the CATH-Gene3D (3), Pfam (3), SUPERFAMILY (7) and PANTHER (153) databases.

Previous release notes

Contents and coverage of InterPro 53.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 53.0 contains 27542 entries (last entry: IPR031339), representing:

InterPro cites 45505 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.5.0 2626 1716
HAMAP 201502.04 2001 1994
PANTHER 9.0 59948 5077
PIRSF 3.01 3285 3224
PRINTS 42.0 2106 2008
PROSITE patterns 20.113 1308 1289
PROSITE profiles 20.113 1112 1087
Pfam 28.0 16230 14065
ProDom 2006.1 1894 1118
SMART 6.2 1008 998
SUPERFAMILY 1.75 2019 1377
TIGRFAMs 15.0 4488 4462

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB2015_085056003541305738 (81.7%)39902165 (78.9%)
UniProtKB/TrEMBL2015_085001102740773008 (81.5%)39374438 (78.7%)
UniProtKB/Swiss-Prot2015_08549008532730 (97.0%)527727 (96.1%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 30920

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO