Release notes
Latest release note
v.52
InterPro 52.0
28th May 2015
28th May 2015
Features include:
- An update to PROSITE patterns (20.113), PROSITE profiles (20.113).
- Integration of 280 new methods from the PANTHER (130), PROSITE patterns (1), PROSITE profiles (32), Pfam (4) and TIGRFAMs (113) databases.
Contents and coverage of InterPro 52.0
InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for
all UniProtKB proteins.
InterPro release 52.0 contains 27463 entries (last entry: IPR031169), representing:
InterPro cites 44894 publications in PubMed.
Member database information
Signature database | Version | Signatures* | Integrated signatures** |
---|---|---|---|
CATH-Gene3D | 3.5.0 | 2626 | 1717 |
HAMAP | 201502.04 | 2001 | 1994 |
PANTHER | 9.0 | 59948 | 4939 |
PIRSF | 3.01 | 3285 | 3223 |
PRINTS | 42.0 | 2106 | 2014 |
PROSITE patterns | 20.113 | 1308 | 1289 |
PROSITE profiles | 20.113 | 1112 | 1087 |
Pfam | 27.0 | 14831 | 14131 |
ProDom | 2006.1 | 1894 | 1118 |
SMART | 6.2 | 1008 | 998 |
SUPERFAMILY | 1.75 | 2019 | 1376 |
TIGRFAMs | 15.0 | 4488 | 4462 |
* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release
Sequence database | Version | Count | Count of proteins matching | |
---|---|---|---|---|
any signature | integrated signatures | |||
UniProtKB | 2015_06 | 49293307 | 40513718 (82.2%) | 39281140 (79.7%) |
UniProtKB/TrEMBL | 2015_06 | 48744721 | 39982100 (82.0%) | 38753434 (79.5%) |
UniProtKB/Swiss-Prot | 2015_06 | 548586 | 531618 (96.9%) | 527706 (96.2%) |
InterPro2GO
Total number of GO terms mapped to InterPro entries - 30782
List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO