Release notes

Latest release note

v.52
InterPro 52.0
28th May 2015

Features include:

  • An update to PROSITE patterns (20.113), PROSITE profiles (20.113).
  • Integration of 280 new methods from the PANTHER (130), PROSITE patterns (1), PROSITE profiles (32), Pfam (4) and TIGRFAMs (113) databases.

Previous release notes

Contents and coverage of InterPro 52.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 52.0 contains 27463 entries (last entry: IPR031169), representing:

InterPro cites 44894 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.5.0 2626 1717
HAMAP 201502.04 2001 1994
PANTHER 9.0 59948 4939
PIRSF 3.01 3285 3223
PRINTS 42.0 2106 2014
PROSITE patterns 20.113 1308 1289
PROSITE profiles 20.113 1112 1087
Pfam 27.0 14831 14131
ProDom 2006.1 1894 1118
SMART 6.2 1008 998
SUPERFAMILY 1.75 2019 1376
TIGRFAMs 15.0 4488 4462

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB2015_064929330740513718 (82.2%)39281140 (79.7%)
UniProtKB/TrEMBL2015_064874472139982100 (82.0%)38753434 (79.5%)
UniProtKB/Swiss-Prot2015_06548586531618 (96.9%)527706 (96.2%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 30782

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO