Release notes

Latest release note

v.50
InterPro 50.0
10th February 2015

Features include:

  • An update to PIRSF (3.01).
  • Integration of 311 new methods from the PANTHER, PIRSF, Pfam and SUPERFAMILY databases.
  • Removal of PfamB database that only represented a subset of the automatically generated Pfam-B annotations and lacked any functional annotation.

Previous release notes

Contents and coverage of InterPro 50.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 50.0 contains 27002 entries (last entry: IPR030689), representing:

InterPro cites 43690 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.5.0 2626 1713
HAMAP 201311.27 1916 1912
PANTHER 9.0 59948 4692
PIRSF 3.01 3285 3223
PRINTS 42.0 2106 2018
PROSITE patterns 20.105 1308 1288
PROSITE profiles 20.105 1087 1057
Pfam 27.0 14831 14125
ProDom 2006.1 1894 1117
SMART 6.2 1008 998
SUPERFAMILY 1.75 2019 1375
TIGRFAMs 13.0 4284 4262

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB2015_029140850478275541 (85.6%)76299523 (83.5%)
UniProtKB/TrEMBL2015_029086090577744878 (85.6%)75772784 (83.4%)
UniProtKB/Swiss-Prot2015_02547599530663 (96.9%)526739 (96.2%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 30091

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO