Release notes

Latest release note

InterPro version 49.0InterPro 49.0
20th November 2014

New features include:

  • An update to PROSITE patterns (20.105), PROSITE profiles (20.105).
  • Integration of 817 new methods from the PANTHER, PROSITE profiles, Pfam and SUPERFAMILY databases.

Previous release notes

Contents and coverage of InterPro 49.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 49.0 contains 26860 entries (last entry: IPR030453), representing:

InterPro cites 42984 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.5.0 2626 1714
HAMAP 201311.27 1916 1912
PANTHER 9.0 59948 4438
PIRSF 2.84 3251 3224
PRINTS 42.0 2106 2021
PROSITE patterns 20.105 1308 1290
PROSITE profiles 20.105 1087 1057
Pfam 27.0 14831 14130
PfamB 27.0 20000 0
ProDom 2006.1 1894 1117
SMART 6.2 1008 998
SUPERFAMILY 1.75 2019 1374
TIGRFAMs 13.0 4284 4264

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB2014_108708318377551098 (89.1%)72652236 (83.4%)
UniProtKB/TrEMBL2014_108653639377018502 (89.0%)72126170 (83.3%)
UniProtKB/Swiss-Prot2014_10546790532596 (97.4%)526066 (96.2%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 29580

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO