Release notes

Latest release note

InterPro version 48.0 InterPro 48.0
17th July 2014

New features include:

  • Integration of 294 new methods from the CATH-Gene3D, PANTHER, Pfam, ProDom and SUPERFAMILY databases.

Previous release notes

Contents and coverage of InterPro 48.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 48.0 contains 26238 entries (last entry: IPR029787), representing:

InterPro cites 41206 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.5.0 2626 1718
HAMAP 201311.27 1916 1912
PANTHER 9.0 59948 3673
PIRSF 2.84 3251 3225
PRINTS 42.0 2106 2024
PROSITE patterns 20.97 1308 1290
PROSITE profiles 20.97 1062 1038
Pfam 27.0 14831 14134
PfamB 27.0 20000 0
ProDom 2006.1 1894 1117
SMART 6.2 1008 998
SUPERFAMILY 1.75 2019 1372
TIGRFAMs 13.0 4284 4265

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB2014_078037024371766615 (89.3%)67116794 (83.5%)
UniProtKB/TrEMBL2014_077982424371234772 (89.2%)66591418 (83.4%)
UniProtKB/Swiss-Prot2014_07546000531843 (97.4%)525376 (96.2%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 28175

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO