Release notes

Latest release note

InterPro version 45.0InterPro 45.0
19th November 2013

New features include:

  • An update to PROSITE patterns (20.97), HAMAP (201310.09), PROSITE profiles (20.97).
  • Integration of 324 new methods from the HAMAP, PANTHER and PROSITE profiles databases.

Previous release notes

Contents and coverage of InterPro 45.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 45.0 contains 25326 entries (last entry: IPR028630), representing:

InterPro cites 39542 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.5.0 2626 1549
HAMAP 201310.09 1916 1892
PANTHER 8.1 76721 3565
PIRSF 2.84 3251 3225
PRINTS 42.0 2106 2035
PROSITE patterns 20.97 1308 1291
PROSITE profiles 20.97 1062 1038
Pfam 27.0 14831 13576
PfamB 27.0 20000 0
ProDom 2006.1 1894 1111
SMART 6.2 1008 999
SUPERFAMILY 1.75 2019 1210
TIGRFAMs 13.0 4284 4269

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB2013_114872218643003019 (88.3%)39888763 (81.9%)
UniProtKB/TrEMBL2013_114818042442475273 (88.2%)39368892 (81.7%)
UniProtKB/Swiss-Prot2013_11541762527746 (97.4%)519871 (96.0%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 27511

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO