Release notes

Latest release note

InterPro version 43.1InterPro 43.1
25th July 2013

New features include:

Previous release notes

Contents and coverage of InterPro 43.1

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 43.1 contains 25214 entries (last entry: IPR028304), representing:

InterPro cites 38877 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.5.0 2626 1553
HAMAP 201302.26 1820 1814
PANTHER 7.2 71246 3531
PIRSF 2.83 3218 3191
PRINTS 42.0 2106 2038
PROSITE patterns 20.89 1308 1291
PROSITE profiles 20.89 1049 1025
Pfam 27.0 14831 13579
PfamB 26.0 20000 0
ProDom 2006.1 1894 1111
SMART 6.2 1008 1001
SUPERFAMILY 1.73 1774 1228
TIGRFAMs 13.0 4284 4272

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB2013_074041112335593153 (88.1%)32863284 (81.3%)
UniProtKB/TrEMBL2013_073987057735066759 (88.0%)32344814 (81.1%)
UniProtKB/Swiss-Prot2013_07540546526394 (97.4%)518470 (95.9%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 27227

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO