Release notes

Latest release note

InterPro version 43.0InterPro 43.0
4th June 2013

New features include:

Problem with InterPro release 43.0
Monday, 10 June 2013 - There was a problem with protein match data in InterPro release 43.0. This issue is now fixed in our 43.1 release.
Please read here for more information.

Previous release notes

Contents and coverage of InterPro 43.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 43.0 contains 24737 entries, (last entry: IPR027810) representing:

InterPro cites 38345 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.5.0 2626 1548
HAMAP 201302.26 1820 1814
PANTHER 7.2 71246 3416
PIRSF 2.83 3218 3191
PRINTS 42.0 2106 2039
PROSITE patterns 20.89 1308 1291
PROSITE profiles 20.89 1049 1025
Pfam 27.0 14831 13079
PfamB 26.0 20000 0
ProDom 2006.1 1894 1107
SMART 6.2 1008 1001
SUPERFAMILY 1.73 1774 1225
TIGRFAMs 13.0 4284 4270

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB 2013_06 36042779 31681267 (87.9%) 29136700 (80.8%)
UniProtKB/TrEMBL 2013_06 35502518 31155141 (87.8%) 28619394 (80.6%)
UniProtKB/Swiss-Prot 2013_06 540261 526126 (97.4%) 517306 (95.8%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 26997

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO