Release notes

Latest release note

InterPro version 42.0InterPro 42.0
4th April 2013

New features include:

Previous release notes

Contents and coverage of InterPro 42.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 42.0 contains 24622 entries, (last entry: IPR027636) representing:

InterPro cites 37735 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.5.0 2626 1547
HAMAP 201302.26 1820 1814
PANTHER 7.2 71246 3245
PIRSF 2.83 3218 3192
PRINTS 42.0 2106 2042
PROSITE patterns 20.89 1308 1291
PROSITE profiles 20.89 1049 1025
Pfam 26.0 13672 13090
PfamB 26.0 20000 0
ProDom 2006.1 1894 1108
SMART 6.2 1008 1001
SUPERFAMILY 1.73 1774 1225
TIGRFAMs 13.0 4284 4272

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB 2013_03 32693414 28852373 (88.3%) 26537344 (81.2%)
UniProtKB/TrEMBL 2013_03 32153798 28327429 (88.1%) 26020593 (80.9%)
UniProtKB/Swiss-Prot 2013_03 539616 524944 (97.3%) 516751 (95.8%)

InterPro2GO

Total number of GO terms mapped to InterPro entries - 26997

List of InterPro2GO mappings. These are also available through the EBI GO browser QuickGO