Release notes

Latest release note

InterPro version 40.0InterPro 40.0
5th November 2012

New features include:

Previous release notes

Contents and coverage of InterPro 40.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 40.0 contains 24117 entries, (last entry: IPR027027) representing:

InterPro cites 35948 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
CATH-Gene3D 3.3.0 2386 1441
HAMAP 201207.04 1749 1738
PANTHER 7.2 71246 2845
PIRSF 2.82 3147 3147
PRINTS 42.0 2106 2051
PROSITE patterns 20.83 1308 1291
PROSITE profiles 20.83 1035 1010
Pfam 26.0 13672 13064
PfamB 26.0 20000 0
ProDom 2006.1 1894 1108
SMART 6.2 1008 1001
SUPERFAMILY 1.73 1774 1207
TIGRFAMs 12.0 4203 4180

* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB 2012_10 27661073 24400012 (88.2%) 22336998 (80.8%)
UniProtKB/TrEMBL 2012_10 27122814 23876065 (88.0%) 21821436 (80.5%)
UniProtKB/Swiss-Prot 2012_10 538259 523947 (97.3%) 515562 (95.8%)

InterPro to GO

Total number of GO terms mapped to InterPro entries - 26023

List of InterPro to GO mappings. These are also available through the EBI GO browser QuickGO