Release notes

Latest release note

InterPro version 39InterPro 39.0
6th September 2012

New features include:

Previous release notes

Contents and coverage of InterPro 39.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 39.0 contains entries, (last entry: ) representing:

Families 15865
Domains 6834
Repeats 269
Sites 824 Conserved sites 636
Active sites 103
Binding sites 69
PTM 16

InterPro cites 35240 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
GENE3D 3.3.0 2386 1442
HAMAP 201207.04 1749 1738
PANTHER 7.2 71246 2518
PIRSF 2.81 3129 3129
PRINTS 42.0 2106 2052
PROSITE patterns 20.83 1308 1291
PROSITE profiles 20.83 1035 1010
Pfam 26.0 13672 12980
PfamB 26.0 20000 0
ProDom 2006.1 1894 1108
SMART 6.2 1008 1001
SUPERFAMILY 1.73 1774 1207
TIGRFAMs 12.0 4203
* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB 2012_08 24532088 21644781 (88.2%) 19809776 (80.8%)
UniProtKB/TrEMBL 2012_08 23994583 21121543 (88.0%) 19295504 (80.4%)
UniProtKB/Swiss-Prot 2012_08 537505 523238 (97.3%) 514272 (95.7%)

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