Release notes

Latest release note

InterPro version 36.0InterPro 36.0
February 2012

New features include:

  • Update to Pfam (26.0) and PIRSF (2.78).
  • Integration of 755 new methods from the GENE3D, PANTHER, PIRSF, Pfam and SUPERFAMILY databases.

Previous release notes

Contents and coverage of InterPro 36.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 36.0 contains 22969 entries, (last entry: IPR025659) representing:

Family 15280
Domain 6613
Repeat 259
Site 817
- Conserved site 633
- Active site 101
- Binding site 67
- PTM 16

InterPro cites 33785 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
GENE3D 3.3.0 2386 1441
HAMAP 140911 1702 1686
PANTHER 7.0 69566 2392
PIRSF 2.78 2983 2983
PRINTS 41.1 2050 2001
PROSITE patterns 20.72 1308 1291
PROSITE profiles 20.72 922 897
Pfam 26.0 13672 12672
PfamB 26.0 20000 0
ProDom 2006.1 1894 1105
SMART 6.2 1008 1002
SUPERFAMILY 1.73 1774 1208
TIGRFAMs 10.1 4023 4002
* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB 2012_02 20662136 18164141 (87.9%) 16537793 (80.0%)
UniProtKB/TrEMBL 2012_02 20127441 17643875 (87.7%) 16027712 (79.6%)
UniProtKB/Swiss-Prot 2012_02 534695 520266 (97.3%) 510081 (95.4%)

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