Release notes

Latest release note

InterPro version 35.0InterPro 35.0
December 2011

New features include:

  • Update to PIRSF (2.77), HAMAP (140911) and SMART (6.2).
  • Integration of 322 new methods from theGENE3D, HAMAP, PANTHER, PIRSF, Pfam, SMART and SUPERFAMILY databases.

Previous release notes

Contents and coverage of InterPro 35.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 35.0 contains 22361 entries, (last entry: IPR024950) representing:

Family 14954
Domain 6330
Repeat 259
Site 818
- Conserved site 634
- Active site 101
- Binding site 67
- PTM 16

InterPro cites 33502 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
GENE3D 3.3.0 2386 1440
HAMAP 140911 1702 1686
PANTHER 7.0 69566 2377
PIRSF 2.77 2951 2950
PRINTS 41.1 2050 2004
PROSITE patterns 20.72 1308 1292
PROSITE profiles 20.72 922 897
Pfam 25.0 12273 12017
PfamB 25.0 20000 0
ProDom 2006.1 1894 1106
SMART 6.2 1008 1002
SUPERFAMILY 1.73 1774 1205
TIGRFAMs 10.1 4023 4003
* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB 2011_12 1904392 16522423 (86.8%) 15170611 (79.7%)
UniProtKB/TrEMBL 2011_12 18510272 16003520 (86.5%) 14661619 (79.2%)
UniProtKB/Swiss-Prot 2011_12 533657 518903 (97.2%) 508992 (95.4%)

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