Release notes

Latest release note

InterPro version 34.0InterPro 34.0
September 2011

New features include:

  • Update to PIRSF (2.76).
  • Integration of 927 new methods from the GENE3D, ProDom, Pfam, PIRSF, PANTHER and SUPERFAMILY databases.

Previous release notes

Contents and coverage of InterPro 34.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins.
InterPro release 34.0 contains 22245 entries, (last entry: IPR024790) representing:

Family 14854
Domain 6309
Repeat 264
Site 818
- Conserved site 634
- Active site 101
- Binding site 67
- PTM 16

InterPro cites 33215 publications in PubMed.

Member database information

Signature database Version Signatures* Integrated signatures**
GENE3D 3.3.0 2386 1439
HAMAP 021210 1675 1647
PANTHER 7.0 69566 2267
PIRSF 2.76 2927 2926
PRINTS 41.1 2050 2007
PROSITE patterns 20.72 1308 1292
PROSITE profiles 20.72 922 897
Pfam 25.0 12273 12015
PfamB 25.0 20000 0
ProDom 2006.1 1894 1107
SMART 6.1 895 882
SUPERFAMILY 1.73 1774 1203
TIGRFAMs 10.1 4023 4003
* Some signatures may not have matches to UniProtKB proteins.
** Not all signatures of a member database may be integrated at the time of an InterPro release

Sequence database Version Count Count of proteins matching
any signature integrated signatures
UniProtKB 2011_09 17418984 15115871 (86.8%) 13873039 (79.6%)
UniProtKB/TrEMBL 2011_09 16886838 14598443 (86.4%) 13365742 (79.1%)
UniProtKB/Swiss-Prot 2011_09 532146 517428 (97.2%) 507297 (95.3%)

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