Release Notes

Release 27.0, 19th May 2010

Previous release notes

New features include:

Contents and coverage of InterPro 27.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins. InterPro release 27.0 contains 20671 entries, representing:

Active site 89
Binding site 62
Conserved site 575
Domain 5515
Family 12718
PTM 16
Region 1441
Repeat 255

Last entry: IPR022762

32095 publications in PUBMED are referenced from InterPro.

Member database information

Signature Database Version Signatures* Integrated Signatures**
GENE3D 3.0.0 2147 1021
HAMAP 280509 1633 621
PANTHER 6.1 30128 2233
PIRSF 2.72 3222 2751
PRINTS 40.0 2000 1954
PROSITE patterns 20.52 1308 1290
PROSITE profiles 20.52 860 836
Pfam 24.0 11912 11285
PfamB 24.0 142303 0
ProDom 2006.1 1894 1011
SMART 6.0 809 801
SUPERFAMILY 1.69 1538 1093
TIGRFAMs 9.0 3808 3795

* Some signatures may not have matches to UniProtKB proteins.

** Not all signatures of a member database may be integrated at the time of an InterPro release.

Sequence Database Version Count count of proteins matching
any signature integrated signatures
UniProtKB 2010_06 11384898 9669145 (84.9%) 8934231 (78.5%)
UniProtKB/TrEMBL 2010_06 10867798 9167041 (84.4%) 8442076 (77.7%)
UniProtKB/Swiss-Prot 2010_06 517100 502104 (97.1%) 492155 (95.2%)

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