Release 25.0, 10th February 2010

Previous release notes

New features include:

Contents and coverage of InterPro 25.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins. InterPro release 25.0 contains 19826 entries, representing:

Active site 84
Binding site 61
Conserved site 562
Domain 5373
Family 12189
Region 1304
PTM 24
Repeat 229

Last entry: IPR022274

27595 publications in PUBMED are referenced from InterPro.

Member database information

Signature Database Version Signatures* Integrated Signatures**
HAMAP 280509 1633 618
PANTHER 6.1 30128 2234
Pfam 24.0 11912 10670
PIRSF 2.71 3219 2740
PRINTS 39.0 1950 1926
ProDom 2006.1 1894 990
PROSITE patterns 20.52 1308 1304
PROSITE profiles 20.52 860 837
SMART 6.0 809 804
TIGRFAMs 9.0 3808 3619
GENE3D 3.0.0 2147 1025
SUPERFAMILY 1.69 1538 1094

* Some signatures may not have matches to UniProtKB proteins.

** Not all signatures of a member database may be integrated at the time of an InterPro release.

Sequence Database Version Count count of proteins matching
any signature integrated signatures
UniProtKB 15.14 10891661 9250563 (84.9%) 8429423 (77.4%)
UniProt/Swiss-Prot 57.14 514789 499951 (97.1%) 487288 (94.7%)
UniProt/TrEMBL 40.14 10376872 8750612 (84.3%) 7942135 (76.5%)

InterPro to GO