Release 23.1, 4 November 2009

Previous release notes

New features include:

Contents and coverage of InterPro 23.1

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtKB proteins. InterPro release 23.1 contains 19269 entries, representing:

Active site 82
Binding site 58
Conserved site 546
Domain 5466
Family 11537
Region 1302
PTM 23
Repeat 255

Last entry: IPR020930

28059 publications in PUBMED are referenced from InterPro.

Member database information

Signature Database Version Signatures* Integrated Signatures**
HAMAP 280509 1633 502
PANTHER 6.1 30128 2234
Pfam 23.0 10340 10329
PIRSF 2.70 2742 2691
PRINTS 39.0 1950 1927
ProDom 2006.1 1894 992
PROSITE patterns 20.52 1308 1304
PROSITE profiles 20.52 860 837
SMART 6.0 809 804
TIGRFAMs 8.0 3603 3581
GENE3D 3.0.0 2147 1026
SUPERFAMILY 1.69 1538 1090

* Some signatures may not have matches to UniProtKB proteins.

** Not all signatures of a member database may be integrated at the time of an InterPro release.

Sequence Database Version Count count of proteins matching
any signature integrated signatures
UniProtKB 15.10 10208308 8123918 (79.6%) 7813392 (76.5%)
UniProt/Swiss-Prot 57.10 512205 492797 (96.2%) 485583 (94.8%)
UniProt/TrEMBL 40.10 9696103 7631121 (78.7%) 7327809 (75.6%)

InterPro to GO