Release 18.0, 02 September 2008

New features include:

Contents and coverage of InterPro 18.0

InterPro protein matches are now calculated for all UniProtKB and UniParc proteins. The following statistics are for all UniProtkB proteins. InterPro release 18.0 contains 16549 entries, representing:

Active site 35
Binding site 24
Conserved site 166
Domain 4941
Family 11128
PTM 18
Repeat 237

Last entry: IPR017954

27432 publications in PUBMED are referenced from InterPro.

Member database information


Signature Database Version Signatures Integrated Signatures
PANTHER 6.1 30127 2067
Pfam 21.0 8956 8955
PIRSF 2.70 2742 2691
PRINTS 38.0 1900 1890
ProDom 2005.1 3538 0
PROSITE patterns 20.35 1316 1312
PROSITE profiles 20.35 801 780
SMART 5.1 724 721
TIGRFAMs 7.0 3423 3393
GENE3D 3.0.0 2147 1017
SUPERFAMILY 1.69 1538 1079

* Some signatures may not have matches to UniProtKB proteins


Sequence Database Version Count count of proteins matching
any signature integrated signatures
UniProtKB 14.1 6610332 5274155 (79.8%) 4998051 (75.6%)
UniProt/Swiss-Prot 56.1 397539 379897 (95.6%) 369830 (93.0%)
UniProt/TrEMBL 39.1 6212793 4894258 (78.8%) 4628221 (74.5%)

InterPro to GO

Deleted IPRs in InterPro

A list of all Deleted IPRs in InterPro