Repeat

WD40-like Beta Propeller (IPR011659)

Short name: PD40

Description

WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [PMID: 11814058, PMID: 10322433]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.

This region appears to be related to the IPR001680 repeat. This model is likely to miss copies within a sequence.

Contributing signatures

Signatures from InterPro member databases are used to construct an entry.
Pfam