Pathways & interactions
Literature: Helix-hairpin-helix DNA-binding motif, class 1 (IPR003583)
References used in this entry
The following publications were referred to in the abstract:
Conserved domains in DNA repair proteins and evolution of repair systems.
Aravind L, Walker DR, Koonin EV.
Nucleic Acids Res. 27 1223-42 1999
PMID: 9973609 Related citations
ComEA is a DNA receptor for transformation of competent Bacillus subtilis.
Provvedi R, Dubnau D.
Mol. Microbiol. 31 271-80 1999
PMID: 9987128 Related citations
Novel DNA binding motifs in the DNA repair enzyme endonuclease III crystal structure.
Thayer MM, Ahern H, Xing D, Cunningham RP, Tainer JA.
EMBO J. 14 4108-20 1995
PMID: 7664751 Related citations
The helix-hairpin-helix DNA-binding motif: a structural basis for non-sequence-specific recognition of DNA.
Doherty AJ, Serpell LC, Ponting CP.
Nucleic Acids Res. 24 2488-97 1996
PMID: 8692686 Related citations
The following publications were not referred to in the abstract, but provide useful additional information:
Peptidyl-CCA deacylation on the ribosome promoted by induced fit and the O3'-hydroxyl group of A76 of the unacylated A-site tRNA.
Simonovic M, Steitz TA.
RNA 14 2372-8 2008
PMID: 18818369 Related citations
Structures of DNA polymerase beta with active-site mismatches suggest a transient abasic site intermediate during misincorporation.
Batra VK, Beard WA, Shock DD, Pedersen LC, Wilson SH.
Mol. Cell 30 315-24 2008
PMID: 18471977 Related citations
Substrate-induced DNA strand misalignment during catalytic cycling by DNA polymerase lambda.
Bebenek K, Garcia-Diaz M, Foley MC, Pedersen LC, Schlick T, Kunkel TA.
EMBO Rep. 9 459-64 2008
PMID: 18369368 Related citations
Crystal structure of the oxazolidinone antibiotic linezolid bound to the 50S ribosomal subunit.
Ippolito JA, Kanyo ZF, Wang D, Franceschi FJ, Moore PB, Steitz TA, Duffy EM.
J. Med. Chem. 51 3353-6 2008
PMID: 18494460 Related citations
Mismatched dNTP incorporation by DNA polymerase beta does not proceed via globally different conformational pathways.
Tang KH, Niebuhr M, Tung CS, Chan HC, Chou CC, Tsai MD.
Nucleic Acids Res. 36 2948-57 2008
PMID: 18385153 Related citations