Domain

TRAM domain (IPR002792)

Short name: TRAM_dom

Domain relationships

None.

Description

The TRAM (after TRM2 and miaB) domain is a 60-70-residue-long module that is found in:

  • Two distinct classes of tRNA-modifying enzymes, namely uridine methylases of the TRM2 family and enzymes of the miaB family that are involved in 2- methylthioadenine formation
  • In several other proteins associated with the translation machinery
  • In a family of small uncharacterised archaeal proteins that are predicted to have a role in the regulation of tRNA modification and/or translation
The TRAM domain can be found alone or in association with other domains, such as the catalytic biotin/lipoate synthetase-like domain, the RNA methylase domain, the ribosomal S2 domain and the eIF2-beta domain. The TRAM domain is predicted to bind tRNA and deliver the RNA-modifying enzymatic domain to their targets [PMID: 11313137]. Secondary structure prediction indicates that the TRAM domain adopts a simple beta-barrel fold. The conservation pattern of the TRAM domain consists primarily of small and hydrophobic residues that correspond to five beta-strands in the predicted secondary structure [PMID: 11313137].

Contributing signatures

Signatures from InterPro member databases are used to construct an entry.
PROSITE profiles
Pfam