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InterPro: IPR005376 Early E2A, DNA/zinc binding

Protein matchesHelp
UniProtKB
Matches:
77 proteins
AccessionHelp IPR005376 Early_E2A_DNA/Zn-bd
TypeHelp Domain
SignaturesHelp
GO Term annotationHelp
Process GO:0006260 DNA replication
Function GO:0003677 DNA binding
GO:0008270 zinc ion binding
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

The adenovirus early E2A DNA-binding protein (Ad DBP) is a multifunctional protein required, amongst other things, for DNA replication and transcription control. It binds to single- and double-stranded DNA, as well as to RNA, in a sequence-independent manner. This signature represents the zinc binding domain of the viral DNA- binding protein, which is active in DNA replication. The zinc atoms appear to be required for the stability of the protein fold rather than being involved in direct contacts with the DNA, the protein contains two zinc atoms in different, novel coordinations. Two copies of this domain are found at the C terminus of many members of the family [1].

Structural linksHelp
SCOP: g.51.1.1
Database linksHelp
PANDIT: PF03728

Taxonomic coverageHelp

Example proteinsHelp
P03265 Early E2A DNA-binding protein

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR003176 Viral DNA-binding protein
IPR005376 Early E2A, DNA/zinc binding
PDB Chain
ModBase
SCOP Domain
CATH Domain

PublicationsHelp
1. Tucker PA, Tsernoglou D, Tucker AD, Coenjaerts FE, Leenders H, van der Vliet PC.
Crystal structure of the adenovirus DNA binding protein reveals a hook-on model for cooperative DNA binding.
EMBO J. 13 2994-3002 1994 [PubMed: 8039495]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=8039495&action=stream&blobtype=pdf

Additional ReadingHelp
Kanellopoulos PN, Tsernoglou D, van der Vliet PC, Tucker PA.
Conformational change of the adenovirus DNA-binding protein induced by soaking crystals with K3UO2F5 solutions.
Acta Crystallogr. D Biol. Crystallogr. 52 1996 942-5 [PubMed: 15299602]
http://dx.doi.org/10.1107/S0907444996005525
Kanellopoulos PN, Tsernoglou D, van der Vliet PC, Tucker PA.
Alternative arrangements of the protein chain are possible for the adenovirus single-stranded DNA binding protein.
J. Mol. Biol. 257 1996 1-8 [PubMed: 8632448]
http://dx.doi.org/10.1006/jmbi.1996.0141
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InterPro 23.1