spacer
spacer

Jump to: InterProScan Databases Documentation FTP site Help Advanced search

InterPro: IPR020084 NUDIX hydrolase, conserved site

Protein matchesHelp
UniProtKB
Matches:
10518 proteins
AccessionHelp IPR020084 NUDIX_hydrolase_CS
TypeHelp Conserved_site
SignaturesHelp
InterPro RelationshipsHelp
Found in IPR000086 NUDIX hydrolase domain
IPR003293 Nudix hydrolase 6-like
IPR003301 Viral protein D10
IPR003561 Mutator MutT protein
IPR003562 Mutator MutX protein
IPR003563 7,8-dihydro-8-oxoguanine triphosphatase
IPR003564 DATP pyrophosphohydrolase
IPR003565 Bis(5'-nucleosyl)-tetraphosphatase
IPR004385 Nucleoside diphosphate pyrophosphatase
IPR014078 Nucleoside triphosphatase YtkD
IPR015797 NUDIX hydrolase domain-like
IPR020476 NUDIX hydrolase
GO Term annotationHelp
Function GO:0016787 hydrolase activity
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

MutT is a small bacterial protein (~12-15Kd) involved in the GO system [1] responsible for removing an oxidatively damaged form of guanine (8-hydroxy- guanine or 7,8-dihydro-8-oxoguanine) from DNA and the nucleotide pool. 8-oxo-dGTP is inserted opposite dA and dC residues of template DNA with near equal efficiency, leading to A.T to G.C transversions. MutT specifically degrades 8-oxo-dGTP to the monophosphate, with the concomitant release of pyrophosphate. A short conserved N-terminal region of mutT (designated the MutT domain) is also found in a variety of other prokaryotic, viral and eukaryotic proteins [2, 3, 4, 5].

The generic name `NUDIX hydrolases' (NUcleoside DIphosphate linked to some other moiety X) has been coined for this domain family [6]. The family can be divided into a number of subgroups, of which MutT anti- mutagenic activity represents only one type; most of the rest hydrolyse diverse nucleoside diphosphate derivatives (including ADP-ribose, GDP- mannose, TDP-glucose, NADH, UDP-sugars, dNTP and NTP).

This signature covers the core region of the NUDIX domain and contains four conserved glutamate residues [2]. The region spanned by this signature could be part of the active centre of a family of pyrophosphate-releasing NTPases.

Structural linksHelp
PDB - click here
CATH: 3.90.79.10
Database linksHelp
Enzyme: EC:3.6.1

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR020084 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
O95989 Diphosphoinositol polyphosphate phosphohydrolase 1

P53550 mRNA-decapping enzyme subunit 2

P93740 Nudix hydrolase 23, chloroplastic

Q8R2U6 Diphosphoinositol polyphosphate phosphohydrolase 2

Q9U2M7 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR015797 NUDIX hydrolase domain-like
IPR007722 Dcp2, box A
IPR003565 Bis(5'-nucleosyl)-tetraphosphatase
IPR020084 NUDIX hydrolase, conserved site
IPR000086 NUDIX hydrolase domain
SWISS-MODEL
PDB Chain
ModBase
CATH Domain
SCOP Domain

PublicationsHelp
1. Michaels ML, Miller JH.
The GO system protects organisms from the mutagenic effect of the spontaneous lesion 8-hydroxyguanine (7,8-dihydro-8-oxoguanine).
J. Bacteriol. 174 6321-5 1992 [PubMed: 1328155]
http://jb.asm.org/cgi/content/abstract/174/20/6321
2. Koonin EV.
A highly conserved sequence motif defining the family of MutT-related proteins from eubacteria, eukaryotes and viruses.
Nucleic Acids Res. 21 4847 1993 [PubMed: 8233837]
http://dx.doi.org/10.1093/nar/21.20.4847
3. Mejean V, Salles C, Bullions LC, Bessman MJ, Claverys JP.
Characterization of the mutX gene of Streptococcus pneumoniae as a homologue of Escherichia coli mutT, and tentative definition of a catalytic domain of the dGTP pyrophosphohydrolases.
Mol. Microbiol. 11 323-30 1994 [PubMed: 8170394]
http://dx.doi.org/10.1111/j.1365-2958.1994.tb00312.x
4. Sakumi K, Furuichi M, Tsuzuki T, Kakuma T, Kawabata S, Maki H, Sekiguchi M.
Cloning and expression of cDNA for a human enzyme that hydrolyzes 8-oxo-dGTP, a mutagenic substrate for DNA synthesis.
J. Biol. Chem. 268 23524-30 1993 [PubMed: 8226881]
http://intl.jbc.org/cgi/content/abstract/268/31/23524
5. McLennan AG.
The MutT motif family of nucleotide phosphohydrolases in man and human pathogens (review).
Int. J. Mol. Med. 4 79-89 1999 [PubMed: 10373642]
6. Bessman MJ, Frick DN, O'Handley SF.
The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes.
J. Biol. Chem. 271 25059-62 1996 [PubMed: 8810257]
http://dx.doi.org/10.1074/jbc.271.41.25059

Additional ReadingHelp
Gabelli SB, Azurmendi HF, Bianchet MA, Amzel LM, Mildvan AS.
X-ray, NMR, and mutational studies of the catalytic cycle of the GDP-mannose mannosyl hydrolase reaction.
Biochemistry 45 2006 11290-303 [PubMed: 16981689]
http://dx.doi.org/10.1021/bi061239g
She M, Decker CJ, Chen N, Tumati S, Parker R, Song H.
Crystal structure and functional analysis of Dcp2p from Schizosaccharomyces pombe.
Nat. Struct. Mol. Biol. 13 2006 63-70 [PubMed: 16341225]
http://dx.doi.org/10.1038/nsmb1033
Thorsell AG, Persson C, Graslund S, Hammarstrom M, Busam RD, Hallberg BM.
Crystal structure of human diphosphoinositol phosphatase 1.
Proteins 77 2009 242-6 [PubMed: 19585659]
http://dx.doi.org/10.1002/prot.22489
Thorne NM, Hankin S, Wilkinson MC, Nunez C, Barraclough R, McLennan AG.
Human diadenosine 5',5"'-P1,P4-tetraphosphate pyrophosphohydrolase is a member of the MutT family of nucleotide pyrophosphatases.
Biochem. J. 311 ( Pt 3) 1995 717-21 [PubMed: 7487923]
http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=EBI&pubmedid=7487923
Buchko GW, Litvinova O, Robinson H, Yakunin AF, Kennedy MA.
Functional and Structural Characterization of DR_0079 from Deinococcus radiodurans, a Novel Nudix Hydrolase with a Preference for Cytosine (Deoxy)ribonucleoside 5'-Di- and Triphosphates.
Biochemistry 2008 [PubMed: 18512963]
Swarbrick JD, Buyya S, Gunawardana D, Gayler KR, McLennan AG, Gooley PR.
Structure and substrate-binding mechanism of human Ap4A hydrolase.
J. Biol. Chem. 280 2005 8471-81 [PubMed: 15596429]
http://dx.doi.org/10.1074/jbc.M412318200
spacer
spacer
InterPro 23.1